Top 10 genes with highest correlation to Rv0629c/recD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5616) | info on Rv1736c/narX |
| Rv2917/- | (cc=0.4732) | info on Rv2917/- |
| Rv2064/cobG | (cc=0.4694) | info on Rv2064/cobG |
| Rv0435c/- | (cc=0.4569) | info on Rv0435c/- |
| Rv3635/- | (cc=0.4549) | info on Rv3635/- |
| Rv3439c/- | (cc=0.4548) | info on Rv3439c/- |
| Rv0203/- | (cc=0.4543) | info on Rv0203/- |
| Rv0229c/- | (cc=0.4461) | info on Rv0229c/- |
| Rv1276c/- | (cc=0.4444) | info on Rv1276c/- |
| Rv1075c/- | (cc=0.4385) | info on Rv1075c/- |
Correlation of Rv0629c/recD with Rv0229c/-
Normalized LFCs for Rv0629c/recD:
(description and provenance of datasets)
| Rv0629c/recD | Rv0229c/- | |
| Fe_supp_jason_reseq | 0.535 | 0.813 |
| low_pH_jason_reseq | -2.044 | -0.32 |
| NO_jason_reseq | -0.323 | -0.184 |
| B6_jason_reseq | 1.265 | 1.177 |
| MHCII_jason_reseq | 1.048 | 0.76 |
| Isoniazid02 | -0.065 | 0.909 |
| Rifampicin4 | 0.401 | 0.225 |
| Ethambutol3 | 0.531 | 1.019 |
| Meropenem3 | 0.224 | 1.029 |
| Vancomycin16 | 0.058 | 0.31 |
| Rv2680_day32 | -0.07 | -0.057 |
| H37Rv_KO_MarP | 0.059 | 0.82 |
| hypoxia_3wks | 0.287 | -0.179 |
| hypoxia_6wks | 0.593 | -0.319 |
| glycerol | 0.753 | -0.538 |
| cholesterol | -0.031 | -0.273 |
| AJ | 0.0 | -0.313 |
| Bibs02 | 0.15 | 0.041 |
| Bibs02c | 0.023 | 1.122 |
| BL6 | -1.107 | 0.289 |
| BL6a | -0.756 | 0.354 |
| BXD01 | -1.06 | -0.479 |
| BXD010 | -0.469 | 0.217 |
| BXD011 | -1.16 | -0.998 |
| BXD03 | -1.1 | -0.36 |
| BXD04 | -0.346 | -1.112 |
| BXD05 | -0.058 | -0.695 |
| BXD06 | -0.708 | -0.629 |
| BXD07 | -0.863 | -0.464 |
| BXD08 | -0.936 | -0.805 |
| BXD09 | -0.473 | -0.324 |
| CAST | -0.232 | -0.08 |
| CCcont | -0.901 | -0.421 |
| DS01 | 0.601 | 0.423 |
| DS02 | -0.244 | 0.6 |
| DS04 | -0.361 | 0.5 |
| DS0c | -0.828 | -0.115 |
| GP01 | -0.803 | 0.177 |
| GP02 | 0.017 | -0.174 |
| GP0c | -0.131 | 0.233 |
| NOD | -0.692 | 0.708 |
| NZO | 0.929 | 0.308 |
| PWK | -0.108 | -0.523 |
| H37Rv_KO_CtpC | 0.301 | -0.652 |
| H37Rv_KO_CtpD | -2.039 | -0.435 |
| H37Rv_KO_Rv1272 | 0.171 | -0.387 |
| H37Rv_KO_SugABC | -1.457 | -0.599 |
| H37Rv_KO_MbtN | -1.275 | -0.886 |
| Trans05 | -0.329 | 0.406 |
| macrophage_unactivated | 0.919 | 1.758 |
| IL1 | -0.196 | 0.24 |
| Rapamycin | 0.258 | -0.11 |
| Tcell | 0.0 | 0.339 |
| GMCSF | -0.615 | -0.063 |
| IFNab | -0.133 | 0.574 |
| IFNg | -0.762 | 0.155 |
| IFNg_GMCSF1 | 0.39 | 0.597 |
| Rv1432_day32 | 0.0 | 0.403 |
| Rv1565c_day32 | 0.578 | -0.057 |
| secA2_input | -1.21 | -0.435 |
| delta_Rv3594 | 0.61 | -0.551 |
| delta_Rv3717 | -0.174 | -0.609 |
| delta_Rv3811 | 1.282 | -0.535 |
| delta_Rv0954 | 0.346 | 0.372 |
| PonA1 | -0.159 | -0.11 |
| EccD1_KO | 0.806 | 0.105 |
| EspI_KO | -1.035 | -0.416 |
| PE35_KO | -0.239 | -0.195 |
| PPE68_KO | -1.161 | -0.323 |
| glycerol2 | -0.769 | 0.376 |
| lignocerate | -1.161 | 0.078 |
| oleate | -0.499 | 0.163 |
| phosphatidylcholine | -0.536 | 0.031 |
| acetate | -1.096 | -0.667 |
| glucAc | -0.364 | -0.385 |
| Rv0950ko | 0.106 | 0.654 |
| Rv1096ko | 0.501 | 1.439 |
| Rv3684ko | -0.236 | 0.514 |
| delta_otsA_trehalose | -1.204 | -0.449 |