Top 10 genes with highest correlation to Rv0629c/recD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5616) | info on Rv1736c/narX |
| Rv2917/- | (cc=0.4732) | info on Rv2917/- |
| Rv2064/cobG | (cc=0.4694) | info on Rv2064/cobG |
| Rv0435c/- | (cc=0.4569) | info on Rv0435c/- |
| Rv3635/- | (cc=0.4549) | info on Rv3635/- |
| Rv3439c/- | (cc=0.4548) | info on Rv3439c/- |
| Rv0203/- | (cc=0.4543) | info on Rv0203/- |
| Rv0229c/- | (cc=0.4461) | info on Rv0229c/- |
| Rv1276c/- | (cc=0.4444) | info on Rv1276c/- |
| Rv1075c/- | (cc=0.4385) | info on Rv1075c/- |
Correlation of Rv0629c/recD with Rv2917/-
Normalized LFCs for Rv0629c/recD:
(description and provenance of datasets)
| Rv0629c/recD | Rv2917/- | |
| Fe_supp_jason_reseq | 0.535 | -0.085 |
| low_pH_jason_reseq | -2.044 | -0.395 |
| NO_jason_reseq | -0.323 | -0.181 |
| B6_jason_reseq | 1.265 | 1.063 |
| MHCII_jason_reseq | 1.048 | 0.894 |
| Isoniazid02 | -0.065 | 0.57 |
| Rifampicin4 | 0.401 | 0.089 |
| Ethambutol3 | 0.531 | 0.99 |
| Meropenem3 | 0.224 | 1.087 |
| Vancomycin16 | 0.058 | 0.231 |
| Rv2680_day32 | -0.07 | -0.055 |
| H37Rv_KO_MarP | 0.059 | 0.051 |
| hypoxia_3wks | 0.287 | 0.323 |
| hypoxia_6wks | 0.593 | 0.169 |
| glycerol | 0.753 | 0.623 |
| cholesterol | -0.031 | 0.27 |
| AJ | 0.0 | 0.061 |
| Bibs02 | 0.15 | 0.49 |
| Bibs02c | 0.023 | 0.652 |
| BL6 | -1.107 | -0.73 |
| BL6a | -0.756 | -0.009 |
| BXD01 | -1.06 | -0.198 |
| BXD010 | -0.469 | -1.009 |
| BXD011 | -1.16 | -0.867 |
| BXD03 | -1.1 | -0.669 |
| BXD04 | -0.346 | -0.998 |
| BXD05 | -0.058 | -0.538 |
| BXD06 | -0.708 | -0.516 |
| BXD07 | -0.863 | -0.675 |
| BXD08 | -0.936 | -0.558 |
| BXD09 | -0.473 | -1.094 |
| CAST | -0.232 | 0.496 |
| CCcont | -0.901 | -0.884 |
| DS01 | 0.601 | 0.601 |
| DS02 | -0.244 | 0.085 |
| DS04 | -0.361 | 0.928 |
| DS0c | -0.828 | 0.338 |
| GP01 | -0.803 | 0.068 |
| GP02 | 0.017 | 0.161 |
| GP0c | -0.131 | -0.041 |
| NOD | -0.692 | 0.376 |
| NZO | 0.929 | 0.273 |
| PWK | -0.108 | 0.618 |
| H37Rv_KO_CtpC | 0.301 | -0.166 |
| H37Rv_KO_CtpD | -2.039 | -0.952 |
| H37Rv_KO_Rv1272 | 0.171 | 0.148 |
| H37Rv_KO_SugABC | -1.457 | 0.876 |
| H37Rv_KO_MbtN | -1.275 | -0.392 |
| Trans05 | -0.329 | -0.065 |
| macrophage_unactivated | 0.919 | -0.063 |
| IL1 | -0.196 | -0.792 |
| Rapamycin | 0.258 | 0.061 |
| Tcell | 0.0 | -0.238 |
| GMCSF | -0.615 | 0.0 |
| IFNab | -0.133 | -0.317 |
| IFNg | -0.762 | 0.027 |
| IFNg_GMCSF1 | 0.39 | 0.063 |
| Rv1432_day32 | 0.0 | 0.112 |
| Rv1565c_day32 | 0.578 | -0.174 |
| secA2_input | -1.21 | -0.501 |
| delta_Rv3594 | 0.61 | 0.395 |
| delta_Rv3717 | -0.174 | 0.792 |
| delta_Rv3811 | 1.282 | 0.327 |
| delta_Rv0954 | 0.346 | 0.684 |
| PonA1 | -0.159 | 0.854 |
| EccD1_KO | 0.806 | 0.753 |
| EspI_KO | -1.035 | 0.436 |
| PE35_KO | -0.239 | 0.123 |
| PPE68_KO | -1.161 | 0.202 |
| glycerol2 | -0.769 | -0.091 |
| lignocerate | -1.161 | -0.387 |
| oleate | -0.499 | 0.379 |
| phosphatidylcholine | -0.536 | 0.16 |
| acetate | -1.096 | -0.416 |
| glucAc | -0.364 | -0.97 |
| Rv0950ko | 0.106 | -0.163 |
| Rv1096ko | 0.501 | 0.793 |
| Rv3684ko | -0.236 | 0.272 |
| delta_otsA_trehalose | -1.204 | 0.718 |