Top 10 genes with highest correlation to Rv0629c/recD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1736c/narX | (cc=0.5616) | info on Rv1736c/narX |
| Rv2917/- | (cc=0.4732) | info on Rv2917/- |
| Rv2064/cobG | (cc=0.4694) | info on Rv2064/cobG |
| Rv0435c/- | (cc=0.4569) | info on Rv0435c/- |
| Rv3635/- | (cc=0.4549) | info on Rv3635/- |
| Rv3439c/- | (cc=0.4548) | info on Rv3439c/- |
| Rv0203/- | (cc=0.4543) | info on Rv0203/- |
| Rv0229c/- | (cc=0.4461) | info on Rv0229c/- |
| Rv1276c/- | (cc=0.4444) | info on Rv1276c/- |
| Rv1075c/- | (cc=0.4385) | info on Rv1075c/- |
Correlation of Rv0629c/recD with Rv0203/-
Normalized LFCs for Rv0629c/recD:
(description and provenance of datasets)
| Rv0629c/recD | Rv0203/- | |
| Fe_supp_jason_reseq | 0.535 | 0.475 |
| low_pH_jason_reseq | -2.044 | 0.035 |
| NO_jason_reseq | -0.323 | 0.835 |
| B6_jason_reseq | 1.265 | 1.205 |
| MHCII_jason_reseq | 1.048 | -0.307 |
| Isoniazid02 | -0.065 | 1.561 |
| Rifampicin4 | 0.401 | 1.097 |
| Ethambutol3 | 0.531 | 0.226 |
| Meropenem3 | 0.224 | 0.689 |
| Vancomycin16 | 0.058 | -0.273 |
| Rv2680_day32 | -0.07 | 0.49 |
| H37Rv_KO_MarP | 0.059 | -0.188 |
| hypoxia_3wks | 0.287 | 0.108 |
| hypoxia_6wks | 0.593 | 1.666 |
| glycerol | 0.753 | 1.069 |
| cholesterol | -0.031 | 0.632 |
| AJ | 0.0 | 0.276 |
| Bibs02 | 0.15 | 1.258 |
| Bibs02c | 0.023 | -0.035 |
| BL6 | -1.107 | -1.154 |
| BL6a | -0.756 | -1.319 |
| BXD01 | -1.06 | -2.062 |
| BXD010 | -0.469 | -0.726 |
| BXD011 | -1.16 | -1.142 |
| BXD03 | -1.1 | -1.759 |
| BXD04 | -0.346 | -2.157 |
| BXD05 | -0.058 | -0.045 |
| BXD06 | -0.708 | -1.304 |
| BXD07 | -0.863 | -0.661 |
| BXD08 | -0.936 | -1.542 |
| BXD09 | -0.473 | -0.921 |
| CAST | -0.232 | 0.262 |
| CCcont | -0.901 | -2.222 |
| DS01 | 0.601 | 0.063 |
| DS02 | -0.244 | 0.481 |
| DS04 | -0.361 | 1.654 |
| DS0c | -0.828 | 0.31 |
| GP01 | -0.803 | -0.647 |
| GP02 | 0.017 | -0.369 |
| GP0c | -0.131 | -1.384 |
| NOD | -0.692 | -0.417 |
| NZO | 0.929 | 0.948 |
| PWK | -0.108 | -1.188 |
| H37Rv_KO_CtpC | 0.301 | -0.706 |
| H37Rv_KO_CtpD | -2.039 | 0.896 |
| H37Rv_KO_Rv1272 | 0.171 | -0.501 |
| H37Rv_KO_SugABC | -1.457 | -1.787 |
| H37Rv_KO_MbtN | -1.275 | -2.03 |
| Trans05 | -0.329 | -1.189 |
| macrophage_unactivated | 0.919 | -1.016 |
| IL1 | -0.196 | -0.208 |
| Rapamycin | 0.258 | 0.442 |
| Tcell | 0.0 | -0.469 |
| GMCSF | -0.615 | 0.478 |
| IFNab | -0.133 | -0.169 |
| IFNg | -0.762 | -0.305 |
| IFNg_GMCSF1 | 0.39 | -0.314 |
| Rv1432_day32 | 0.0 | 1.073 |
| Rv1565c_day32 | 0.578 | -1.899 |
| secA2_input | -1.21 | 0.809 |
| delta_Rv3594 | 0.61 | 1.776 |
| delta_Rv3717 | -0.174 | 1.547 |
| delta_Rv3811 | 1.282 | 2.425 |
| delta_Rv0954 | 0.346 | 1.371 |
| PonA1 | -0.159 | 1.686 |
| EccD1_KO | 0.806 | 0.809 |
| EspI_KO | -1.035 | 0.482 |
| PE35_KO | -0.239 | 0.963 |
| PPE68_KO | -1.161 | 0.39 |
| glycerol2 | -0.769 | -2.364 |
| lignocerate | -1.161 | -2.288 |
| oleate | -0.499 | -1.52 |
| phosphatidylcholine | -0.536 | -1.765 |
| acetate | -1.096 | -0.377 |
| glucAc | -0.364 | -1.84 |
| Rv0950ko | 0.106 | 1.143 |
| Rv1096ko | 0.501 | 1.333 |
| Rv3684ko | -0.236 | 2.292 |
| delta_otsA_trehalose | -1.204 | -2.108 |