Top 10 genes with highest correlation to Rv0569/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2636/- | (cc=0.5775) | info on Rv2636/- |
| Rv1708/- | (cc=0.5756) | info on Rv1708/- |
| Rv1736c/narX | (cc=0.574) | info on Rv1736c/narX |
| Rv3445c/esxU | (cc=0.5653) | info on Rv3445c/esxU |
| Rv3652/PE_PGRS60 | (cc=0.5626) | info on Rv3652/PE_PGRS60 |
| Rv1973/- | (cc=0.5544) | info on Rv1973/- |
| Rv0139/- | (cc=0.542) | info on Rv0139/- |
| Rv2669/- | (cc=0.5412) | info on Rv2669/- |
| Rv1967/mce3B | (cc=0.5332) | info on Rv1967/mce3B |
| Rv0447c/ufaA1 | (cc=0.5325) | info on Rv0447c/ufaA1 |
Correlation of Rv0569/- with Rv3652/PE_PGRS60
Normalized LFCs for Rv0569/-:
(description and provenance of datasets)
| Rv0569/- | Rv3652/PE_PGRS60 | |
| Fe_supp_jason_reseq | -1.485 | -0.27 |
| low_pH_jason_reseq | -0.716 | 1.079 |
| NO_jason_reseq | -0.252 | 0.186 |
| B6_jason_reseq | 1.587 | 0.641 |
| MHCII_jason_reseq | 1.691 | 0.67 |
| Isoniazid02 | -0.192 | 0.33 |
| Rifampicin4 | 0.154 | -0.217 |
| Ethambutol3 | 1.679 | 0.169 |
| Meropenem3 | -0.053 | 0.153 |
| Vancomycin16 | 0.528 | 1.101 |
| Rv2680_day32 | -0.348 | 2.801 |
| H37Rv_KO_MarP | -0.461 | 0.104 |
| hypoxia_3wks | -0.08 | 0.618 |
| hypoxia_6wks | -0.75 | 0.084 |
| glycerol | -0.43 | 0.62 |
| cholesterol | -0.452 | 0.779 |
| AJ | -0.294 | -0.111 |
| Bibs02 | 0.691 | 0.699 |
| Bibs02c | -1.079 | -0.573 |
| BL6 | -0.127 | -1.002 |
| BL6a | -1.181 | -0.512 |
| BXD01 | -0.636 | -0.249 |
| BXD010 | -1.186 | -0.837 |
| BXD011 | -1.267 | -0.305 |
| BXD03 | -1.296 | -1.399 |
| BXD04 | 0.528 | -0.409 |
| BXD05 | -1.498 | -0.534 |
| BXD06 | -1.592 | -0.522 |
| BXD07 | -1.04 | -0.716 |
| BXD08 | -1.694 | -0.091 |
| BXD09 | -1.476 | -0.683 |
| CAST | -0.506 | 0.155 |
| CCcont | -1.548 | -1.008 |
| DS01 | 0.373 | 0.712 |
| DS02 | 0.165 | -0.26 |
| DS04 | -0.202 | 0.557 |
| DS0c | 0.178 | -0.508 |
| GP01 | 0.776 | -0.386 |
| GP02 | 1.362 | 0.445 |
| GP0c | -0.815 | -0.907 |
| NOD | 0.171 | -0.462 |
| NZO | -0.686 | 0.262 |
| PWK | -0.361 | -0.618 |
| H37Rv_KO_CtpC | -1.599 | -2.385 |
| H37Rv_KO_CtpD | -1.699 | -1.86 |
| H37Rv_KO_Rv1272 | -1.84 | -0.668 |
| H37Rv_KO_SugABC | -2.259 | -1.701 |
| H37Rv_KO_MbtN | -2.547 | -0.861 |
| Trans05 | -1.505 | -1.511 |
| macrophage_unactivated | -0.148 | 0.114 |
| IL1 | -0.178 | 1.21 |
| Rapamycin | -1.356 | -0.377 |
| Tcell | -0.544 | -0.222 |
| GMCSF | -0.618 | 0.61 |
| IFNab | -0.142 | 1.233 |
| IFNg | -0.216 | -0.139 |
| IFNg_GMCSF1 | -1.373 | 0.138 |
| Rv1432_day32 | -0.508 | 0.343 |
| Rv1565c_day32 | 0.199 | 0.722 |
| secA2_input | 0.805 | -0.258 |
| delta_Rv3594 | -0.184 | -0.376 |
| delta_Rv3717 | 0.297 | 0.789 |
| delta_Rv3811 | 0.593 | -0.291 |
| delta_Rv0954 | -0.518 | 0.247 |
| PonA1 | 0.128 | -0.455 |
| EccD1_KO | 0.428 | 0.638 |
| EspI_KO | 0.459 | 0.428 |
| PE35_KO | -0.099 | 1.152 |
| PPE68_KO | -0.205 | 0.729 |
| glycerol2 | 1.08 | 0.42 |
| lignocerate | -0.408 | -0.161 |
| oleate | 1.253 | 0.961 |
| phosphatidylcholine | 0.255 | 0.193 |
| acetate | -0.49 | -0.091 |
| glucAc | -1.225 | -0.6 |
| Rv0950ko | 0.0 | -0.226 |
| Rv1096ko | 0.452 | 0.422 |
| Rv3684ko | 0.131 | 0.177 |
| delta_otsA_trehalose | 1.266 | 1.871 |