Top 10 genes with highest correlation to Rv0569/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2636/- | (cc=0.5775) | info on Rv2636/- |
| Rv1708/- | (cc=0.5756) | info on Rv1708/- |
| Rv1736c/narX | (cc=0.574) | info on Rv1736c/narX |
| Rv3445c/esxU | (cc=0.5653) | info on Rv3445c/esxU |
| Rv3652/PE_PGRS60 | (cc=0.5626) | info on Rv3652/PE_PGRS60 |
| Rv1973/- | (cc=0.5544) | info on Rv1973/- |
| Rv0139/- | (cc=0.542) | info on Rv0139/- |
| Rv2669/- | (cc=0.5412) | info on Rv2669/- |
| Rv1967/mce3B | (cc=0.5332) | info on Rv1967/mce3B |
| Rv0447c/ufaA1 | (cc=0.5325) | info on Rv0447c/ufaA1 |
Correlation of Rv0569/- with Rv0139/-
Normalized LFCs for Rv0569/-:
(description and provenance of datasets)
| Rv0569/- | Rv0139/- | |
| Fe_supp_jason_reseq | -1.485 | -0.447 |
| low_pH_jason_reseq | -0.716 | 0.032 |
| NO_jason_reseq | -0.252 | 0.21 |
| B6_jason_reseq | 1.587 | 0.667 |
| MHCII_jason_reseq | 1.691 | 0.715 |
| Isoniazid02 | -0.192 | 0.045 |
| Rifampicin4 | 0.154 | -0.536 |
| Ethambutol3 | 1.679 | 2.085 |
| Meropenem3 | -0.053 | 0.017 |
| Vancomycin16 | 0.528 | -0.172 |
| Rv2680_day32 | -0.348 | 1.71 |
| H37Rv_KO_MarP | -0.461 | 0.186 |
| hypoxia_3wks | -0.08 | 0.048 |
| hypoxia_6wks | -0.75 | -0.111 |
| glycerol | -0.43 | 0.26 |
| cholesterol | -0.452 | 0.07 |
| AJ | -0.294 | 0.108 |
| Bibs02 | 0.691 | -0.195 |
| Bibs02c | -1.079 | 0.418 |
| BL6 | -0.127 | -0.668 |
| BL6a | -1.181 | -0.296 |
| BXD01 | -0.636 | -0.691 |
| BXD010 | -1.186 | -0.799 |
| BXD011 | -1.267 | -0.864 |
| BXD03 | -1.296 | -0.533 |
| BXD04 | 0.528 | -0.374 |
| BXD05 | -1.498 | -0.818 |
| BXD06 | -1.592 | -0.588 |
| BXD07 | -1.04 | -0.797 |
| BXD08 | -1.694 | -0.073 |
| BXD09 | -1.476 | -1.175 |
| CAST | -0.506 | 0.305 |
| CCcont | -1.548 | -1.12 |
| DS01 | 0.373 | -0.021 |
| DS02 | 0.165 | -0.348 |
| DS04 | -0.202 | 0.021 |
| DS0c | 0.178 | 0.528 |
| GP01 | 0.776 | 0.27 |
| GP02 | 1.362 | -0.118 |
| GP0c | -0.815 | -0.278 |
| NOD | 0.171 | -0.098 |
| NZO | -0.686 | 0.253 |
| PWK | -0.361 | 0.209 |
| H37Rv_KO_CtpC | -1.599 | -0.715 |
| H37Rv_KO_CtpD | -1.699 | 0.468 |
| H37Rv_KO_Rv1272 | -1.84 | -0.779 |
| H37Rv_KO_SugABC | -2.259 | -1.098 |
| H37Rv_KO_MbtN | -2.547 | -0.293 |
| Trans05 | -1.505 | -0.469 |
| macrophage_unactivated | -0.148 | -0.836 |
| IL1 | -0.178 | -0.581 |
| Rapamycin | -1.356 | -0.414 |
| Tcell | -0.544 | -0.74 |
| GMCSF | -0.618 | -0.158 |
| IFNab | -0.142 | -0.148 |
| IFNg | -0.216 | -0.16 |
| IFNg_GMCSF1 | -1.373 | -0.352 |
| Rv1432_day32 | -0.508 | -0.533 |
| Rv1565c_day32 | 0.199 | -0.058 |
| secA2_input | 0.805 | 0.125 |
| delta_Rv3594 | -0.184 | 0.517 |
| delta_Rv3717 | 0.297 | 0.487 |
| delta_Rv3811 | 0.593 | 0.333 |
| delta_Rv0954 | -0.518 | 0.689 |
| PonA1 | 0.128 | 0.085 |
| EccD1_KO | 0.428 | 0.451 |
| EspI_KO | 0.459 | -0.134 |
| PE35_KO | -0.099 | -0.545 |
| PPE68_KO | -0.205 | -0.275 |
| glycerol2 | 1.08 | 0.224 |
| lignocerate | -0.408 | -0.162 |
| oleate | 1.253 | 0.271 |
| phosphatidylcholine | 0.255 | -0.253 |
| acetate | -0.49 | -0.672 |
| glucAc | -1.225 | -0.609 |
| Rv0950ko | 0.0 | -0.072 |
| Rv1096ko | 0.452 | 0.0 |
| Rv3684ko | 0.131 | 0.282 |
| delta_otsA_trehalose | 1.266 | 0.065 |