Top 10 genes with highest correlation to Rv0569/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2636/- | (cc=0.5775) | info on Rv2636/- |
| Rv1708/- | (cc=0.5756) | info on Rv1708/- |
| Rv1736c/narX | (cc=0.574) | info on Rv1736c/narX |
| Rv3445c/esxU | (cc=0.5653) | info on Rv3445c/esxU |
| Rv3652/PE_PGRS60 | (cc=0.5626) | info on Rv3652/PE_PGRS60 |
| Rv1973/- | (cc=0.5544) | info on Rv1973/- |
| Rv0139/- | (cc=0.542) | info on Rv0139/- |
| Rv2669/- | (cc=0.5412) | info on Rv2669/- |
| Rv1967/mce3B | (cc=0.5332) | info on Rv1967/mce3B |
| Rv0447c/ufaA1 | (cc=0.5325) | info on Rv0447c/ufaA1 |
Correlation of Rv0569/- with Rv3445c/esxU
Normalized LFCs for Rv0569/-:
(description and provenance of datasets)
| Rv0569/- | Rv3445c/esxU | |
| Fe_supp_jason_reseq | -1.485 | -0.854 |
| low_pH_jason_reseq | -0.716 | -0.778 |
| NO_jason_reseq | -0.252 | 0.011 |
| B6_jason_reseq | 1.587 | 1.196 |
| MHCII_jason_reseq | 1.691 | 1.337 |
| Isoniazid02 | -0.192 | 0.106 |
| Rifampicin4 | 0.154 | -0.208 |
| Ethambutol3 | 1.679 | 0.054 |
| Meropenem3 | -0.053 | 1.584 |
| Vancomycin16 | 0.528 | -0.061 |
| Rv2680_day32 | -0.348 | -0.72 |
| H37Rv_KO_MarP | -0.461 | -0.801 |
| hypoxia_3wks | -0.08 | -0.379 |
| hypoxia_6wks | -0.75 | -0.205 |
| glycerol | -0.43 | -1.697 |
| cholesterol | -0.452 | -0.468 |
| AJ | -0.294 | -0.069 |
| Bibs02 | 0.691 | 0.633 |
| Bibs02c | -1.079 | 0.33 |
| BL6 | -0.127 | -1.139 |
| BL6a | -1.181 | -0.598 |
| BXD01 | -0.636 | -0.715 |
| BXD010 | -1.186 | -1.243 |
| BXD011 | -1.267 | -0.593 |
| BXD03 | -1.296 | -0.593 |
| BXD04 | 0.528 | -0.114 |
| BXD05 | -1.498 | -1.909 |
| BXD06 | -1.592 | -1.022 |
| BXD07 | -1.04 | -1.357 |
| BXD08 | -1.694 | -0.366 |
| BXD09 | -1.476 | -1.355 |
| CAST | -0.506 | -0.158 |
| CCcont | -1.548 | -1.298 |
| DS01 | 0.373 | 0.956 |
| DS02 | 0.165 | 1.1 |
| DS04 | -0.202 | 0.305 |
| DS0c | 0.178 | 0.544 |
| GP01 | 0.776 | 0.275 |
| GP02 | 1.362 | 0.421 |
| GP0c | -0.815 | 0.528 |
| NOD | 0.171 | -0.83 |
| NZO | -0.686 | -0.335 |
| PWK | -0.361 | -0.033 |
| H37Rv_KO_CtpC | -1.599 | -0.86 |
| H37Rv_KO_CtpD | -1.699 | -3.872 |
| H37Rv_KO_Rv1272 | -1.84 | -3.257 |
| H37Rv_KO_SugABC | -2.259 | -1.838 |
| H37Rv_KO_MbtN | -2.547 | -0.933 |
| Trans05 | -1.505 | -1.718 |
| macrophage_unactivated | -0.148 | 0.379 |
| IL1 | -0.178 | -0.214 |
| Rapamycin | -1.356 | -0.301 |
| Tcell | -0.544 | 0.254 |
| GMCSF | -0.618 | 0.528 |
| IFNab | -0.142 | -0.2 |
| IFNg | -0.216 | -1.053 |
| IFNg_GMCSF1 | -1.373 | 1.109 |
| Rv1432_day32 | -0.508 | 0.567 |
| Rv1565c_day32 | 0.199 | 0.232 |
| secA2_input | 0.805 | 2.519 |
| delta_Rv3594 | -0.184 | 0.0 |
| delta_Rv3717 | 0.297 | -0.189 |
| delta_Rv3811 | 0.593 | -0.335 |
| delta_Rv0954 | -0.518 | 0.758 |
| PonA1 | 0.128 | 0.427 |
| EccD1_KO | 0.428 | 0.47 |
| EspI_KO | 0.459 | 0.747 |
| PE35_KO | -0.099 | 1.158 |
| PPE68_KO | -0.205 | -0.022 |
| glycerol2 | 1.08 | 0.867 |
| lignocerate | -0.408 | 0.96 |
| oleate | 1.253 | 0.988 |
| phosphatidylcholine | 0.255 | 0.81 |
| acetate | -0.49 | 1.335 |
| glucAc | -1.225 | 0.023 |
| Rv0950ko | 0.0 | 1.375 |
| Rv1096ko | 0.452 | 2.576 |
| Rv3684ko | 0.131 | 1.772 |
| delta_otsA_trehalose | 1.266 | -1.792 |