Top 10 genes with highest correlation to Rv0561c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3283/sseA | (cc=0.7895) | info on Rv3283/sseA |
| Rv0406c/- | (cc=0.74) | info on Rv0406c/- |
| Rv2563/- | (cc=0.7349) | info on Rv2563/- |
| Rv1287/- | (cc=0.6926) | info on Rv1287/- |
| Rv2564/glnQ | (cc=0.6793) | info on Rv2564/glnQ |
| Rv3651/- | (cc=0.6476) | info on Rv3651/- |
| Rv0910/- | (cc=0.6446) | info on Rv0910/- |
| Rv1473/- | (cc=0.6311) | info on Rv1473/- |
| Rv2681/- | (cc=0.6068) | info on Rv2681/- |
| Rv1592c/- | (cc=0.6019) | info on Rv1592c/- |
Correlation of Rv0561c/- with Rv2681/-
Normalized LFCs for Rv0561c/-:
(description and provenance of datasets)
| Rv0561c/- | Rv2681/- | |
| Fe_supp_jason_reseq | 2.559 | 1.628 |
| low_pH_jason_reseq | 0.0 | 0.102 |
| NO_jason_reseq | -0.995 | -1.494 |
| B6_jason_reseq | -0.421 | -1.794 |
| MHCII_jason_reseq | 0.742 | 0.06 |
| Isoniazid02 | -0.045 | 1.116 |
| Rifampicin4 | -1.887 | 0.0 |
| Ethambutol3 | -0.517 | -0.528 |
| Meropenem3 | -0.895 | 0.074 |
| Vancomycin16 | -1.021 | -1.804 |
| Rv2680_day32 | -0.554 | -0.971 |
| H37Rv_KO_MarP | -0.838 | 1.769 |
| hypoxia_3wks | -1.543 | -0.969 |
| hypoxia_6wks | -1.599 | -1.355 |
| glycerol | 2.098 | 1.17 |
| cholesterol | 1.736 | -0.141 |
| AJ | -1.531 | -0.901 |
| Bibs02 | -0.563 | -0.624 |
| Bibs02c | -0.353 | -0.873 |
| BL6 | -2.023 | -2.702 |
| BL6a | -1.148 | -1.543 |
| BXD01 | -2.107 | -3.117 |
| BXD010 | -2.072 | -3.065 |
| BXD011 | -1.711 | -2.752 |
| BXD03 | -2.187 | -2.921 |
| BXD04 | -1.877 | -2.49 |
| BXD05 | -2.042 | -2.979 |
| BXD06 | -2.159 | -3.285 |
| BXD07 | -2.101 | -3.407 |
| BXD08 | -2.151 | -3.273 |
| BXD09 | -2.273 | -3.274 |
| CAST | -2.181 | -0.125 |
| CCcont | -0.552 | -1.248 |
| DS01 | 1.685 | 0.713 |
| DS02 | -0.544 | 1.419 |
| DS04 | -0.911 | 0.914 |
| DS0c | 1.37 | 0.369 |
| GP01 | -1.409 | -2.66 |
| GP02 | -1.263 | -2.4 |
| GP0c | -2.103 | -3.503 |
| NOD | -0.903 | -0.029 |
| NZO | -2.381 | -1.342 |
| PWK | -1.137 | 0.473 |
| H37Rv_KO_CtpC | -0.941 | -1.589 |
| H37Rv_KO_CtpD | -1.603 | -0.579 |
| H37Rv_KO_Rv1272 | -0.872 | -2.354 |
| H37Rv_KO_SugABC | -1.414 | -1.995 |
| H37Rv_KO_MbtN | -1.471 | -2.226 |
| Trans05 | -1.983 | -2.413 |
| macrophage_unactivated | -0.316 | -2.702 |
| IL1 | -1.735 | -3.197 |
| Rapamycin | -1.795 | -2.627 |
| Tcell | -0.671 | -2.789 |
| GMCSF | -1.18 | -3.063 |
| IFNab | -0.623 | -3.773 |
| IFNg | -1.195 | -3.1 |
| IFNg_GMCSF1 | -0.314 | -2.275 |
| Rv1432_day32 | -0.632 | -2.117 |
| Rv1565c_day32 | 0.0 | 0.625 |
| secA2_input | 0.676 | 0.518 |
| delta_Rv3594 | -0.684 | -2.518 |
| delta_Rv3717 | -0.736 | -3.253 |
| delta_Rv3811 | -0.665 | -2.858 |
| delta_Rv0954 | 2.95 | -0.079 |
| PonA1 | 2.163 | 0.705 |
| EccD1_KO | -0.26 | -0.066 |
| EspI_KO | 0.739 | 0.217 |
| PE35_KO | 0.496 | 0.432 |
| PPE68_KO | 0.394 | -0.39 |
| glycerol2 | -1.366 | 0.863 |
| lignocerate | -0.759 | -0.242 |
| oleate | -3.187 | -0.846 |
| phosphatidylcholine | -0.036 | 0.731 |
| acetate | 1.25 | 0.15 |
| glucAc | 0.853 | 1.115 |
| Rv0950ko | -0.989 | -0.482 |
| Rv1096ko | -0.549 | -0.57 |
| Rv3684ko | -0.596 | -0.91 |
| delta_otsA_trehalose | -0.234 | 1.041 |