Top 10 genes with highest correlation to Rv0561c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3283/sseA | (cc=0.7895) | info on Rv3283/sseA |
| Rv0406c/- | (cc=0.74) | info on Rv0406c/- |
| Rv2563/- | (cc=0.7349) | info on Rv2563/- |
| Rv1287/- | (cc=0.6926) | info on Rv1287/- |
| Rv2564/glnQ | (cc=0.6793) | info on Rv2564/glnQ |
| Rv3651/- | (cc=0.6476) | info on Rv3651/- |
| Rv0910/- | (cc=0.6446) | info on Rv0910/- |
| Rv1473/- | (cc=0.6311) | info on Rv1473/- |
| Rv2681/- | (cc=0.6068) | info on Rv2681/- |
| Rv1592c/- | (cc=0.6019) | info on Rv1592c/- |
Correlation of Rv0561c/- with Rv0406c/-
Normalized LFCs for Rv0561c/-:
(description and provenance of datasets)
| Rv0561c/- | Rv0406c/- | |
| Fe_supp_jason_reseq | 2.559 | 1.271 |
| low_pH_jason_reseq | 0.0 | -0.669 |
| NO_jason_reseq | -0.995 | -2.746 |
| B6_jason_reseq | -0.421 | -0.444 |
| MHCII_jason_reseq | 0.742 | 0.577 |
| Isoniazid02 | -0.045 | 0.662 |
| Rifampicin4 | -1.887 | -1.034 |
| Ethambutol3 | -0.517 | 0.355 |
| Meropenem3 | -0.895 | 0.512 |
| Vancomycin16 | -1.021 | 0.801 |
| Rv2680_day32 | -0.554 | -1.486 |
| H37Rv_KO_MarP | -0.838 | -1.834 |
| hypoxia_3wks | -1.543 | -1.376 |
| hypoxia_6wks | -1.599 | -1.56 |
| glycerol | 2.098 | 0.762 |
| cholesterol | 1.736 | 0.333 |
| AJ | -1.531 | -1.55 |
| Bibs02 | -0.563 | -0.538 |
| Bibs02c | -0.353 | 0.203 |
| BL6 | -2.023 | -2.306 |
| BL6a | -1.148 | -0.913 |
| BXD01 | -2.107 | -1.496 |
| BXD010 | -2.072 | -2.642 |
| BXD011 | -1.711 | -1.921 |
| BXD03 | -2.187 | -2.456 |
| BXD04 | -1.877 | -2.246 |
| BXD05 | -2.042 | -3.033 |
| BXD06 | -2.159 | -2.285 |
| BXD07 | -2.101 | -2.857 |
| BXD08 | -2.151 | -1.232 |
| BXD09 | -2.273 | -2.371 |
| CAST | -2.181 | -2.002 |
| CCcont | -0.552 | -0.757 |
| DS01 | 1.685 | 1.316 |
| DS02 | -0.544 | 1.18 |
| DS04 | -0.911 | 1.31 |
| DS0c | 1.37 | 1.139 |
| GP01 | -1.409 | -2.109 |
| GP02 | -1.263 | -1.808 |
| GP0c | -2.103 | -1.088 |
| NOD | -0.903 | -1.246 |
| NZO | -2.381 | -2.349 |
| PWK | -1.137 | -1.384 |
| H37Rv_KO_CtpC | -0.941 | -0.785 |
| H37Rv_KO_CtpD | -1.603 | -1.885 |
| H37Rv_KO_Rv1272 | -0.872 | -1.52 |
| H37Rv_KO_SugABC | -1.414 | -2.115 |
| H37Rv_KO_MbtN | -1.471 | -2.24 |
| Trans05 | -1.983 | -1.893 |
| macrophage_unactivated | -0.316 | 0.496 |
| IL1 | -1.735 | -1.026 |
| Rapamycin | -1.795 | -1.062 |
| Tcell | -0.671 | 0.648 |
| GMCSF | -1.18 | 0.182 |
| IFNab | -0.623 | -0.296 |
| IFNg | -1.195 | -0.543 |
| IFNg_GMCSF1 | -0.314 | -0.638 |
| Rv1432_day32 | -0.632 | -1.724 |
| Rv1565c_day32 | 0.0 | 1.02 |
| secA2_input | 0.676 | 0.498 |
| delta_Rv3594 | -0.684 | -0.854 |
| delta_Rv3717 | -0.736 | -1.193 |
| delta_Rv3811 | -0.665 | -2.061 |
| delta_Rv0954 | 2.95 | 1.234 |
| PonA1 | 2.163 | 0.613 |
| EccD1_KO | -0.26 | 1.779 |
| EspI_KO | 0.739 | 0.299 |
| PE35_KO | 0.496 | 1.639 |
| PPE68_KO | 0.394 | 1.645 |
| glycerol2 | -1.366 | -2.404 |
| lignocerate | -0.759 | -1.577 |
| oleate | -3.187 | -3.281 |
| phosphatidylcholine | -0.036 | -1.172 |
| acetate | 1.25 | 0.101 |
| glucAc | 0.853 | -0.419 |
| Rv0950ko | -0.989 | 0.748 |
| Rv1096ko | -0.549 | 0.591 |
| Rv3684ko | -0.596 | -0.675 |
| delta_otsA_trehalose | -0.234 | 0.133 |