Top 10 genes with highest correlation to Rv0557/mgtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0375c/- | (cc=0.4927) | info on Rv0375c/- |
| Rv2384/mbtA | (cc=0.4529) | info on Rv2384/mbtA |
| Rv2998/- | (cc=0.4462) | info on Rv2998/- |
| Rv3636/- | (cc=0.4454) | info on Rv3636/- |
| Rv3334/- | (cc=0.4376) | info on Rv3334/- |
| Rv1060/- | (cc=0.4357) | info on Rv1060/- |
| Rv2484c/- | (cc=0.4303) | info on Rv2484c/- |
| Rv0869c/moaA2 | (cc=0.4292) | info on Rv0869c/moaA2 |
| Rv0274/- | (cc=0.4018) | info on Rv0274/- |
| Rv0044c/- | (cc=0.3889) | info on Rv0044c/- |
Correlation of Rv0557/mgtA with Rv3636/-
Normalized LFCs for Rv0557/mgtA:
(description and provenance of datasets)
| Rv0557/mgtA | Rv3636/- | |
| Fe_supp_jason_reseq | 0.0 | 0.559 |
| low_pH_jason_reseq | 0.341 | -0.032 |
| NO_jason_reseq | -0.488 | 1.391 |
| B6_jason_reseq | 0.532 | 0.093 |
| MHCII_jason_reseq | -0.232 | 0.991 |
| Isoniazid02 | 0.65 | 0.288 |
| Rifampicin4 | 0.173 | 0.707 |
| Ethambutol3 | 0.423 | 0.136 |
| Meropenem3 | -0.254 | 1.744 |
| Vancomycin16 | 1.313 | 0.875 |
| Rv2680_day32 | -2.937 | -2.621 |
| H37Rv_KO_MarP | 0.94 | 0.831 |
| hypoxia_3wks | 0.207 | 0.315 |
| hypoxia_6wks | -0.474 | -0.453 |
| glycerol | 0.275 | 1.059 |
| cholesterol | 0.478 | -0.057 |
| AJ | -0.237 | 0.977 |
| Bibs02 | -1.462 | -0.766 |
| Bibs02c | -0.579 | -0.418 |
| BL6 | 0.58 | -0.488 |
| BL6a | -0.611 | -0.284 |
| BXD01 | -0.065 | 0.873 |
| BXD010 | -0.315 | 0.852 |
| BXD011 | -0.571 | 0.591 |
| BXD03 | -0.606 | -0.509 |
| BXD04 | 0.341 | -0.012 |
| BXD05 | 0.064 | 0.331 |
| BXD06 | -0.456 | 0.349 |
| BXD07 | 0.482 | 0.864 |
| BXD08 | 0.093 | 0.585 |
| BXD09 | -0.181 | 0.336 |
| CAST | 0.881 | -0.232 |
| CCcont | -0.785 | -0.231 |
| DS01 | -0.371 | 0.195 |
| DS02 | 0.432 | 0.274 |
| DS04 | 0.676 | 0.357 |
| DS0c | 0.152 | -0.385 |
| GP01 | -0.049 | -0.386 |
| GP02 | -0.916 | 0.451 |
| GP0c | -0.489 | 0.798 |
| NOD | 0.158 | -1.362 |
| NZO | -0.552 | 1.445 |
| PWK | -0.148 | 1.017 |
| H37Rv_KO_CtpC | -0.611 | 0.246 |
| H37Rv_KO_CtpD | -1.689 | 0.36 |
| H37Rv_KO_Rv1272 | 1.105 | 0.909 |
| H37Rv_KO_SugABC | -0.408 | 0.206 |
| H37Rv_KO_MbtN | -1.289 | 0.407 |
| Trans05 | -1.862 | 1.694 |
| macrophage_unactivated | 1.405 | -0.041 |
| IL1 | -0.641 | 0.62 |
| Rapamycin | 0.577 | 0.979 |
| Tcell | 0.495 | 0.492 |
| GMCSF | -0.333 | 0.301 |
| IFNab | -0.248 | -0.248 |
| IFNg | 0.208 | 0.853 |
| IFNg_GMCSF1 | 1.112 | 1.295 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | -0.381 | 0.329 |
| secA2_input | -0.521 | -0.675 |
| delta_Rv3594 | -1.75 | -1.104 |
| delta_Rv3717 | -0.941 | -0.106 |
| delta_Rv3811 | -1.029 | -0.462 |
| delta_Rv0954 | 0.129 | 0.49 |
| PonA1 | -0.799 | -0.021 |
| EccD1_KO | 0.0 | -0.335 |
| EspI_KO | 0.55 | 0.251 |
| PE35_KO | 0.0 | 0.172 |
| PPE68_KO | 1.161 | 0.096 |
| glycerol2 | -0.311 | 0.097 |
| lignocerate | -1.161 | -0.077 |
| oleate | 0.213 | 0.62 |
| phosphatidylcholine | -0.391 | 0.06 |
| acetate | -1.297 | -0.432 |
| glucAc | -2.417 | -0.582 |
| Rv0950ko | 0.0 | 0.938 |
| Rv1096ko | 1.65 | 2.129 |
| Rv3684ko | 1.536 | 1.634 |
| delta_otsA_trehalose | -0.807 | -1.138 |