Top 10 genes with highest correlation to Rv0557/mgtA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0375c/- | (cc=0.4927) | info on Rv0375c/- |
| Rv2384/mbtA | (cc=0.4529) | info on Rv2384/mbtA |
| Rv2998/- | (cc=0.4462) | info on Rv2998/- |
| Rv3636/- | (cc=0.4454) | info on Rv3636/- |
| Rv3334/- | (cc=0.4376) | info on Rv3334/- |
| Rv1060/- | (cc=0.4357) | info on Rv1060/- |
| Rv2484c/- | (cc=0.4303) | info on Rv2484c/- |
| Rv0869c/moaA2 | (cc=0.4292) | info on Rv0869c/moaA2 |
| Rv0274/- | (cc=0.4018) | info on Rv0274/- |
| Rv0044c/- | (cc=0.3889) | info on Rv0044c/- |
Correlation of Rv0557/mgtA with Rv2384/mbtA
Normalized LFCs for Rv0557/mgtA:
(description and provenance of datasets)
| Rv0557/mgtA | Rv2384/mbtA | |
| Fe_supp_jason_reseq | 0.0 | 0.696 |
| low_pH_jason_reseq | 0.341 | 0.323 |
| NO_jason_reseq | -0.488 | -0.583 |
| B6_jason_reseq | 0.532 | -0.538 |
| MHCII_jason_reseq | -0.232 | -0.474 |
| Isoniazid02 | 0.65 | -0.7 |
| Rifampicin4 | 0.173 | 0.19 |
| Ethambutol3 | 0.423 | -1.216 |
| Meropenem3 | -0.254 | -0.28 |
| Vancomycin16 | 1.313 | -0.265 |
| Rv2680_day32 | -2.937 | -2.469 |
| H37Rv_KO_MarP | 0.94 | 1.803 |
| hypoxia_3wks | 0.207 | -1.782 |
| hypoxia_6wks | -0.474 | -1.222 |
| glycerol | 0.275 | 0.727 |
| cholesterol | 0.478 | 0.91 |
| AJ | -0.237 | -0.471 |
| Bibs02 | -1.462 | -0.832 |
| Bibs02c | -0.579 | -0.587 |
| BL6 | 0.58 | -0.694 |
| BL6a | -0.611 | -0.901 |
| BXD01 | -0.065 | -0.723 |
| BXD010 | -0.315 | -0.711 |
| BXD011 | -0.571 | -0.707 |
| BXD03 | -0.606 | -0.75 |
| BXD04 | 0.341 | -0.686 |
| BXD05 | 0.064 | -0.747 |
| BXD06 | -0.456 | -0.607 |
| BXD07 | 0.482 | -0.768 |
| BXD08 | 0.093 | -0.738 |
| BXD09 | -0.181 | -0.78 |
| CAST | 0.881 | 0.137 |
| CCcont | -0.785 | -0.303 |
| DS01 | -0.371 | 2.712 |
| DS02 | 0.432 | 2.001 |
| DS04 | 0.676 | 2.062 |
| DS0c | 0.152 | 0.251 |
| GP01 | -0.049 | -0.548 |
| GP02 | -0.916 | -0.462 |
| GP0c | -0.489 | -0.721 |
| NOD | 0.158 | 0.0 |
| NZO | -0.552 | -0.727 |
| PWK | -0.148 | -0.55 |
| H37Rv_KO_CtpC | -0.611 | 0.438 |
| H37Rv_KO_CtpD | -1.689 | 0.075 |
| H37Rv_KO_Rv1272 | 1.105 | -0.783 |
| H37Rv_KO_SugABC | -0.408 | -0.55 |
| H37Rv_KO_MbtN | -1.289 | -0.469 |
| Trans05 | -1.862 | -0.725 |
| macrophage_unactivated | 1.405 | 0.436 |
| IL1 | -0.641 | 0.0 |
| Rapamycin | 0.577 | 0.0 |
| Tcell | 0.495 | 1.58 |
| GMCSF | -0.333 | 0.0 |
| IFNab | -0.248 | 0.0 |
| IFNg | 0.208 | 0.0 |
| IFNg_GMCSF1 | 1.112 | 0.826 |
| Rv1432_day32 | 0.0 | -0.343 |
| Rv1565c_day32 | -0.381 | 0.381 |
| secA2_input | -0.521 | 1.471 |
| delta_Rv3594 | -1.75 | -1.234 |
| delta_Rv3717 | -0.941 | -0.927 |
| delta_Rv3811 | -1.029 | -1.426 |
| delta_Rv0954 | 0.129 | 0.053 |
| PonA1 | -0.799 | -0.098 |
| EccD1_KO | 0.0 | 2.161 |
| EspI_KO | 0.55 | 1.452 |
| PE35_KO | 0.0 | 1.596 |
| PPE68_KO | 1.161 | 1.872 |
| glycerol2 | -0.311 | -0.82 |
| lignocerate | -1.161 | -0.591 |
| oleate | 0.213 | -0.829 |
| phosphatidylcholine | -0.391 | -0.679 |
| acetate | -1.297 | -1.342 |
| glucAc | -2.417 | -0.405 |
| Rv0950ko | 0.0 | 0.311 |
| Rv1096ko | 1.65 | 0.875 |
| Rv3684ko | 1.536 | 1.091 |
| delta_otsA_trehalose | -0.807 | 0.574 |