Top 10 genes with highest correlation to Rv0504c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1432/- | (cc=0.5909) | info on Rv1432/- |
| Rv0411c/glnH | (cc=0.5876) | info on Rv0411c/glnH |
| Rv0126/treS | (cc=0.5539) | info on Rv0126/treS |
| Rv0410c/pknG | (cc=0.5536) | info on Rv0410c/pknG |
| Rv2894c/xerC | (cc=0.5312) | info on Rv2894c/xerC |
| Rv2051c/ppm1 | (cc=0.5258) | info on Rv2051c/ppm1 |
| Rv0470c/pcaA | (cc=0.5208) | info on Rv0470c/pcaA |
| Rv0412c/- | (cc=0.5071) | info on Rv0412c/- |
| Rv1348/irtA | (cc=0.5071) | info on Rv1348/irtA |
| Rv2737c/recA | (cc=0.4955) | info on Rv2737c/recA |
Correlation of Rv0504c/- with Rv0470c/pcaA
Normalized LFCs for Rv0504c/-:
(description and provenance of datasets)
| Rv0504c/- | Rv0470c/pcaA | |
| Fe_supp_jason_reseq | 1.68 | 5.522 |
| low_pH_jason_reseq | -0.231 | 3.346 |
| NO_jason_reseq | -0.362 | -2.263 |
| B6_jason_reseq | -0.153 | -1.11 |
| MHCII_jason_reseq | -0.135 | -0.842 |
| Isoniazid02 | 0.383 | -0.37 |
| Rifampicin4 | 0.0 | 0.996 |
| Ethambutol3 | 0.0 | 1.299 |
| Meropenem3 | 0.0 | -0.673 |
| Vancomycin16 | 0.0 | 1.979 |
| Rv2680_day32 | -2.085 | -2.939 |
| H37Rv_KO_MarP | -2.565 | -0.284 |
| hypoxia_3wks | -1.049 | -4.737 |
| hypoxia_6wks | -0.263 | -3.46 |
| glycerol | 0.439 | 2.07 |
| cholesterol | -0.398 | 0.509 |
| AJ | -0.637 | -1.681 |
| Bibs02 | 0.725 | -1.917 |
| Bibs02c | -0.574 | 0.459 |
| BL6 | -0.343 | -1.198 |
| BL6a | -0.544 | -0.462 |
| BXD01 | -0.358 | -1.496 |
| BXD010 | -0.352 | -1.227 |
| BXD011 | 0.759 | -0.756 |
| BXD03 | -0.371 | -1.553 |
| BXD04 | -0.34 | -1.42 |
| BXD05 | -0.369 | -1.411 |
| BXD06 | -0.366 | -1.064 |
| BXD07 | -0.38 | -1.21 |
| BXD08 | -0.365 | -1.394 |
| BXD09 | -0.386 | -1.473 |
| CAST | -0.632 | -1.23 |
| CCcont | 2.776 | 2.083 |
| DS01 | -0.412 | 1.261 |
| DS02 | -0.597 | 1.686 |
| DS04 | -0.533 | 0.0 |
| DS0c | 1.087 | 0.217 |
| GP01 | -0.271 | -1.134 |
| GP02 | -0.228 | -0.955 |
| GP0c | -0.357 | -1.493 |
| NOD | -0.392 | 0.0 |
| NZO | -0.548 | -1.91 |
| PWK | -0.539 | -1.289 |
| H37Rv_KO_CtpC | 0.0 | 0.309 |
| H37Rv_KO_CtpD | 0.189 | -0.139 |
| H37Rv_KO_Rv1272 | -0.246 | -1.478 |
| H37Rv_KO_SugABC | -0.272 | -0.949 |
| H37Rv_KO_MbtN | 0.224 | -0.385 |
| Trans05 | -0.228 | -1.041 |
| macrophage_unactivated | 0.436 | 2.964 |
| IL1 | 0.0 | -0.374 |
| Rapamycin | 0.0 | -0.387 |
| Tcell | 1.235 | 3.812 |
| GMCSF | 0.0 | -0.333 |
| IFNab | 0.417 | 0.0 |
| IFNg | 0.0 | -0.703 |
| IFNg_GMCSF1 | 0.0 | -0.826 |
| Rv1432_day32 | -0.494 | -0.343 |
| Rv1565c_day32 | -0.924 | 2.088 |
| secA2_input | -1.731 | -2.926 |
| delta_Rv3594 | 0.197 | -0.679 |
| delta_Rv3717 | 0.536 | -0.487 |
| delta_Rv3811 | -0.529 | -0.66 |
| delta_Rv0954 | 1.076 | 3.358 |
| PonA1 | 1.547 | 4.067 |
| EccD1_KO | 0.51 | -0.839 |
| EspI_KO | -0.408 | -1.298 |
| PE35_KO | 1.625 | 1.485 |
| PPE68_KO | 0.723 | -0.39 |
| glycerol2 | -0.82 | -2.371 |
| lignocerate | -0.712 | -1.058 |
| oleate | -0.829 | -1.733 |
| phosphatidylcholine | -0.819 | -1.95 |
| acetate | -0.973 | 0.419 |
| glucAc | -0.605 | 0.456 |
| Rv0950ko | 1.481 | -1.625 |
| Rv1096ko | 0.85 | -0.766 |
| Rv3684ko | 0.249 | -0.537 |
| delta_otsA_trehalose | -0.818 | -0.973 |