Top 10 genes with highest correlation to Rv0502/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2185c/TB16.3 | (cc=0.8023) | info on Rv2185c/TB16.3 |
| Rv0501/galE2 | (cc=0.7955) | info on Rv0501/galE2 |
| Rv0642c/mmaA4 | (cc=0.7774) | info on Rv0642c/mmaA4 |
| Rv3050c/- | (cc=0.7399) | info on Rv3050c/- |
| Rv1780/- | (cc=0.7318) | info on Rv1780/- |
| Rv1058/fadD14 | (cc=0.7215) | info on Rv1058/fadD14 |
| Rv2184c/- | (cc=0.715) | info on Rv2184c/- |
| Rv1335/cysO | (cc=0.7142) | info on Rv1335/cysO |
| Rv2569c/- | (cc=0.7071) | info on Rv2569c/- |
| Rv0644c/mmaA2 | (cc=0.7025) | info on Rv0644c/mmaA2 |
Correlation of Rv0502/- with Rv3050c/-
Normalized LFCs for Rv0502/-:
(description and provenance of datasets)
| Rv0502/- | Rv3050c/- | |
| Fe_supp_jason_reseq | 0.696 | -1.053 |
| low_pH_jason_reseq | 1.318 | 1.193 |
| NO_jason_reseq | 1.78 | 0.522 |
| B6_jason_reseq | -0.709 | -2.547 |
| MHCII_jason_reseq | 0.086 | -1.955 |
| Isoniazid02 | -0.332 | -0.063 |
| Rifampicin4 | 0.623 | -2.594 |
| Ethambutol3 | 0.023 | -0.612 |
| Meropenem3 | 0.289 | -0.918 |
| Vancomycin16 | -0.767 | -1.496 |
| Rv2680_day32 | 0.065 | 1.932 |
| H37Rv_KO_MarP | 0.608 | 0.906 |
| hypoxia_3wks | 2.544 | 1.611 |
| hypoxia_6wks | 1.639 | 2.7 |
| glycerol | 1.066 | 1.104 |
| cholesterol | 0.715 | -0.098 |
| AJ | 0.904 | 0.541 |
| Bibs02 | 0.199 | 0.115 |
| Bibs02c | 0.059 | 0.258 |
| BL6 | 1.258 | 2.934 |
| BL6a | 2.429 | 4.475 |
| BXD01 | 2.883 | 3.241 |
| BXD010 | 2.113 | 3.787 |
| BXD011 | 2.075 | 5.572 |
| BXD03 | 1.244 | 3.365 |
| BXD04 | 2.334 | 2.343 |
| BXD05 | 2.061 | 3.473 |
| BXD06 | 2.32 | 3.983 |
| BXD07 | 2.325 | 3.042 |
| BXD08 | 1.898 | 3.65 |
| BXD09 | 2.995 | 4.687 |
| CAST | -0.771 | -0.501 |
| CCcont | 2.029 | 2.452 |
| DS01 | 0.489 | -0.926 |
| DS02 | 0.55 | -0.852 |
| DS04 | 1.216 | 2.503 |
| DS0c | 0.823 | 0.616 |
| GP01 | 1.933 | 3.843 |
| GP02 | 1.699 | 1.738 |
| GP0c | 1.132 | 3.849 |
| NOD | -0.236 | -0.151 |
| NZO | 0.267 | -0.433 |
| PWK | -1.037 | -0.274 |
| H37Rv_KO_CtpC | 0.198 | 1.177 |
| H37Rv_KO_CtpD | 1.721 | 1.634 |
| H37Rv_KO_Rv1272 | 2.664 | 3.492 |
| H37Rv_KO_SugABC | 1.635 | 4.142 |
| H37Rv_KO_MbtN | 2.769 | 2.344 |
| Trans05 | 3.129 | 4.016 |
| macrophage_unactivated | 1.49 | 0.063 |
| IL1 | -1.797 | 0.291 |
| Rapamycin | -0.166 | 1.019 |
| Tcell | 1.411 | 2.255 |
| GMCSF | -0.23 | -0.573 |
| IFNab | 0.623 | 0.599 |
| IFNg | -0.676 | -1.227 |
| IFNg_GMCSF1 | -0.38 | -0.61 |
| Rv1432_day32 | 2.034 | 5.592 |
| Rv1565c_day32 | -1.219 | 0.458 |
| secA2_input | -0.471 | 0.321 |
| delta_Rv3594 | 0.74 | 1.42 |
| delta_Rv3717 | 1.886 | 3.259 |
| delta_Rv3811 | 1.108 | 0.932 |
| delta_Rv0954 | -1.868 | -1.765 |
| PonA1 | -1.487 | -1.855 |
| EccD1_KO | -1.075 | -2.072 |
| EspI_KO | -0.613 | -3.274 |
| PE35_KO | -1.654 | -1.613 |
| PPE68_KO | -1.494 | -1.261 |
| glycerol2 | 0.551 | -3.636 |
| lignocerate | -0.111 | -2.568 |
| oleate | 0.801 | -3.374 |
| phosphatidylcholine | -0.419 | -3.892 |
| acetate | 0.284 | -1.584 |
| glucAc | 0.006 | -0.723 |
| Rv0950ko | -1.01 | -0.874 |
| Rv1096ko | -1.439 | -1.384 |
| Rv3684ko | -1.061 | 1.952 |
| delta_otsA_trehalose | -0.207 | -0.519 |