Top 10 genes with highest correlation to Rv0502/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2185c/TB16.3 | (cc=0.8023) | info on Rv2185c/TB16.3 |
| Rv0501/galE2 | (cc=0.7955) | info on Rv0501/galE2 |
| Rv0642c/mmaA4 | (cc=0.7774) | info on Rv0642c/mmaA4 |
| Rv3050c/- | (cc=0.7399) | info on Rv3050c/- |
| Rv1780/- | (cc=0.7318) | info on Rv1780/- |
| Rv1058/fadD14 | (cc=0.7215) | info on Rv1058/fadD14 |
| Rv2184c/- | (cc=0.715) | info on Rv2184c/- |
| Rv1335/cysO | (cc=0.7142) | info on Rv1335/cysO |
| Rv2569c/- | (cc=0.7071) | info on Rv2569c/- |
| Rv0644c/mmaA2 | (cc=0.7025) | info on Rv0644c/mmaA2 |
Correlation of Rv0502/- with Rv0642c/mmaA4
Normalized LFCs for Rv0502/-:
(description and provenance of datasets)
| Rv0502/- | Rv0642c/mmaA4 | |
| Fe_supp_jason_reseq | 0.696 | 1.547 |
| low_pH_jason_reseq | 1.318 | 2.202 |
| NO_jason_reseq | 1.78 | 2.678 |
| B6_jason_reseq | -0.709 | -2.886 |
| MHCII_jason_reseq | 0.086 | -1.687 |
| Isoniazid02 | -0.332 | -1.333 |
| Rifampicin4 | 0.623 | -1.565 |
| Ethambutol3 | 0.023 | -2.112 |
| Meropenem3 | 0.289 | -1.815 |
| Vancomycin16 | -0.767 | -6.0 |
| Rv2680_day32 | 0.065 | -0.359 |
| H37Rv_KO_MarP | 0.608 | 0.571 |
| hypoxia_3wks | 2.544 | -0.937 |
| hypoxia_6wks | 1.639 | 3.548 |
| glycerol | 1.066 | 1.556 |
| cholesterol | 0.715 | -0.145 |
| AJ | 0.904 | 0.585 |
| Bibs02 | 0.199 | 0.717 |
| Bibs02c | 0.059 | 2.877 |
| BL6 | 1.258 | 2.544 |
| BL6a | 2.429 | 3.946 |
| BXD01 | 2.883 | 4.224 |
| BXD010 | 2.113 | 4.186 |
| BXD011 | 2.075 | 6.0 |
| BXD03 | 1.244 | 4.026 |
| BXD04 | 2.334 | 3.598 |
| BXD05 | 2.061 | 4.7 |
| BXD06 | 2.32 | 5.627 |
| BXD07 | 2.325 | 4.784 |
| BXD08 | 1.898 | 5.896 |
| BXD09 | 2.995 | 4.223 |
| CAST | -0.771 | -0.23 |
| CCcont | 2.029 | 5.608 |
| DS01 | 0.489 | -0.236 |
| DS02 | 0.55 | -0.217 |
| DS04 | 1.216 | 2.617 |
| DS0c | 0.823 | -0.217 |
| GP01 | 1.933 | 6.0 |
| GP02 | 1.699 | 3.274 |
| GP0c | 1.132 | 6.0 |
| NOD | -0.236 | 0.0 |
| NZO | 0.267 | -0.199 |
| PWK | -1.037 | 0.342 |
| H37Rv_KO_CtpC | 0.198 | 4.153 |
| H37Rv_KO_CtpD | 1.721 | 1.805 |
| H37Rv_KO_Rv1272 | 2.664 | 4.035 |
| H37Rv_KO_SugABC | 1.635 | 1.362 |
| H37Rv_KO_MbtN | 2.769 | 6.0 |
| Trans05 | 3.129 | 4.713 |
| macrophage_unactivated | 1.49 | -3.595 |
| IL1 | -1.797 | 0.297 |
| Rapamycin | -0.166 | -0.706 |
| Tcell | 1.411 | -0.124 |
| GMCSF | -0.23 | -3.126 |
| IFNab | 0.623 | -0.883 |
| IFNg | -0.676 | -4.153 |
| IFNg_GMCSF1 | -0.38 | -5.477 |
| Rv1432_day32 | 2.034 | -0.98 |
| Rv1565c_day32 | -1.219 | -1.21 |
| secA2_input | -0.471 | 0.424 |
| delta_Rv3594 | 0.74 | 1.768 |
| delta_Rv3717 | 1.886 | 3.284 |
| delta_Rv3811 | 1.108 | 1.646 |
| delta_Rv0954 | -1.868 | -2.158 |
| PonA1 | -1.487 | -6.0 |
| EccD1_KO | -1.075 | -6.0 |
| EspI_KO | -0.613 | -6.0 |
| PE35_KO | -1.654 | -6.0 |
| PPE68_KO | -1.494 | -6.0 |
| glycerol2 | 0.551 | -1.684 |
| lignocerate | -0.111 | -1.464 |
| oleate | 0.801 | -1.167 |
| phosphatidylcholine | -0.419 | -1.683 |
| acetate | 0.284 | -1.561 |
| glucAc | 0.006 | -0.451 |
| Rv0950ko | -1.01 | -3.98 |
| Rv1096ko | -1.439 | -3.906 |
| Rv3684ko | -1.061 | -1.628 |
| delta_otsA_trehalose | -0.207 | -0.595 |