Top 10 genes with highest correlation to Rv0502/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2185c/TB16.3 | (cc=0.8023) | info on Rv2185c/TB16.3 |
| Rv0501/galE2 | (cc=0.7955) | info on Rv0501/galE2 |
| Rv0642c/mmaA4 | (cc=0.7774) | info on Rv0642c/mmaA4 |
| Rv3050c/- | (cc=0.7399) | info on Rv3050c/- |
| Rv1780/- | (cc=0.7318) | info on Rv1780/- |
| Rv1058/fadD14 | (cc=0.7215) | info on Rv1058/fadD14 |
| Rv2184c/- | (cc=0.715) | info on Rv2184c/- |
| Rv1335/cysO | (cc=0.7142) | info on Rv1335/cysO |
| Rv2569c/- | (cc=0.7071) | info on Rv2569c/- |
| Rv0644c/mmaA2 | (cc=0.7025) | info on Rv0644c/mmaA2 |
Correlation of Rv0502/- with Rv1335/cysO
Normalized LFCs for Rv0502/-:
(description and provenance of datasets)
| Rv0502/- | Rv1335/cysO | |
| Fe_supp_jason_reseq | 0.696 | -0.205 |
| low_pH_jason_reseq | 1.318 | 1.85 |
| NO_jason_reseq | 1.78 | 1.273 |
| B6_jason_reseq | -0.709 | 1.058 |
| MHCII_jason_reseq | 0.086 | -0.572 |
| Isoniazid02 | -0.332 | -0.207 |
| Rifampicin4 | 0.623 | 1.145 |
| Ethambutol3 | 0.023 | -1.267 |
| Meropenem3 | 0.289 | -0.089 |
| Vancomycin16 | -0.767 | 0.377 |
| Rv2680_day32 | 0.065 | -0.382 |
| H37Rv_KO_MarP | 0.608 | -0.628 |
| hypoxia_3wks | 2.544 | 1.547 |
| hypoxia_6wks | 1.639 | 2.76 |
| glycerol | 1.066 | -1.404 |
| cholesterol | 0.715 | -1.103 |
| AJ | 0.904 | -0.819 |
| Bibs02 | 0.199 | -0.375 |
| Bibs02c | 0.059 | 1.058 |
| BL6 | 1.258 | 1.805 |
| BL6a | 2.429 | 1.578 |
| BXD01 | 2.883 | 1.794 |
| BXD010 | 2.113 | 2.143 |
| BXD011 | 2.075 | 2.581 |
| BXD03 | 1.244 | 1.328 |
| BXD04 | 2.334 | 1.063 |
| BXD05 | 2.061 | 2.237 |
| BXD06 | 2.32 | 1.975 |
| BXD07 | 2.325 | 1.892 |
| BXD08 | 1.898 | 1.74 |
| BXD09 | 2.995 | 1.611 |
| CAST | -0.771 | -1.974 |
| CCcont | 2.029 | 0.075 |
| DS01 | 0.489 | -0.809 |
| DS02 | 0.55 | -1.09 |
| DS04 | 1.216 | 0.655 |
| DS0c | 0.823 | -0.754 |
| GP01 | 1.933 | 1.708 |
| GP02 | 1.699 | 3.674 |
| GP0c | 1.132 | 1.509 |
| NOD | -0.236 | -0.605 |
| NZO | 0.267 | 1.053 |
| PWK | -1.037 | -1.204 |
| H37Rv_KO_CtpC | 0.198 | 0.487 |
| H37Rv_KO_CtpD | 1.721 | 1.144 |
| H37Rv_KO_Rv1272 | 2.664 | 1.102 |
| H37Rv_KO_SugABC | 1.635 | 2.017 |
| H37Rv_KO_MbtN | 2.769 | 1.675 |
| Trans05 | 3.129 | 1.853 |
| macrophage_unactivated | 1.49 | -1.016 |
| IL1 | -1.797 | -0.448 |
| Rapamycin | -0.166 | 0.114 |
| Tcell | 1.411 | -0.329 |
| GMCSF | -0.23 | -1.803 |
| IFNab | 0.623 | -0.272 |
| IFNg | -0.676 | -0.275 |
| IFNg_GMCSF1 | -0.38 | -0.867 |
| Rv1432_day32 | 2.034 | 1.035 |
| Rv1565c_day32 | -1.219 | -1.854 |
| secA2_input | -0.471 | -1.025 |
| delta_Rv3594 | 0.74 | -0.289 |
| delta_Rv3717 | 1.886 | 1.003 |
| delta_Rv3811 | 1.108 | -0.083 |
| delta_Rv0954 | -1.868 | -1.016 |
| PonA1 | -1.487 | -1.772 |
| EccD1_KO | -1.075 | -0.924 |
| EspI_KO | -0.613 | 0.108 |
| PE35_KO | -1.654 | -1.68 |
| PPE68_KO | -1.494 | -1.459 |
| glycerol2 | 0.551 | -0.37 |
| lignocerate | -0.111 | -1.583 |
| oleate | 0.801 | 2.205 |
| phosphatidylcholine | -0.419 | -0.919 |
| acetate | 0.284 | 0.165 |
| glucAc | 0.006 | -0.703 |
| Rv0950ko | -1.01 | -0.163 |
| Rv1096ko | -1.439 | -0.787 |
| Rv3684ko | -1.061 | -0.233 |
| delta_otsA_trehalose | -0.207 | 1.062 |