Top 10 genes with highest correlation to Rv0502/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2185c/TB16.3 | (cc=0.8023) | info on Rv2185c/TB16.3 |
| Rv0501/galE2 | (cc=0.7955) | info on Rv0501/galE2 |
| Rv0642c/mmaA4 | (cc=0.7774) | info on Rv0642c/mmaA4 |
| Rv3050c/- | (cc=0.7399) | info on Rv3050c/- |
| Rv1780/- | (cc=0.7318) | info on Rv1780/- |
| Rv1058/fadD14 | (cc=0.7215) | info on Rv1058/fadD14 |
| Rv2184c/- | (cc=0.715) | info on Rv2184c/- |
| Rv1335/cysO | (cc=0.7142) | info on Rv1335/cysO |
| Rv2569c/- | (cc=0.7071) | info on Rv2569c/- |
| Rv0644c/mmaA2 | (cc=0.7025) | info on Rv0644c/mmaA2 |
Correlation of Rv0502/- with Rv2569c/-
Normalized LFCs for Rv0502/-:
(description and provenance of datasets)
| Rv0502/- | Rv2569c/- | |
| Fe_supp_jason_reseq | 0.696 | -0.766 |
| low_pH_jason_reseq | 1.318 | 4.047 |
| NO_jason_reseq | 1.78 | 0.189 |
| B6_jason_reseq | -0.709 | -0.428 |
| MHCII_jason_reseq | 0.086 | -1.818 |
| Isoniazid02 | -0.332 | 1.48 |
| Rifampicin4 | 0.623 | 1.362 |
| Ethambutol3 | 0.023 | 0.34 |
| Meropenem3 | 0.289 | -0.219 |
| Vancomycin16 | -0.767 | 0.22 |
| Rv2680_day32 | 0.065 | 1.68 |
| H37Rv_KO_MarP | 0.608 | -1.442 |
| hypoxia_3wks | 2.544 | 0.913 |
| hypoxia_6wks | 1.639 | 1.817 |
| glycerol | 1.066 | 1.758 |
| cholesterol | 0.715 | -0.469 |
| AJ | 0.904 | -0.168 |
| Bibs02 | 0.199 | -0.592 |
| Bibs02c | 0.059 | -0.074 |
| BL6 | 1.258 | 1.376 |
| BL6a | 2.429 | 1.291 |
| BXD01 | 2.883 | 1.652 |
| BXD010 | 2.113 | 1.471 |
| BXD011 | 2.075 | 1.184 |
| BXD03 | 1.244 | 1.115 |
| BXD04 | 2.334 | 1.702 |
| BXD05 | 2.061 | 1.344 |
| BXD06 | 2.32 | 2.282 |
| BXD07 | 2.325 | 0.877 |
| BXD08 | 1.898 | 2.006 |
| BXD09 | 2.995 | 1.306 |
| CAST | -0.771 | 0.0 |
| CCcont | 2.029 | 2.716 |
| DS01 | 0.489 | 0.0 |
| DS02 | 0.55 | 0.0 |
| DS04 | 1.216 | 0.533 |
| DS0c | 0.823 | -0.157 |
| GP01 | 1.933 | 1.855 |
| GP02 | 1.699 | 0.672 |
| GP0c | 1.132 | 1.333 |
| NOD | -0.236 | -0.727 |
| NZO | 0.267 | -0.22 |
| PWK | -1.037 | 0.0 |
| H37Rv_KO_CtpC | 0.198 | -0.379 |
| H37Rv_KO_CtpD | 1.721 | 1.044 |
| H37Rv_KO_Rv1272 | 2.664 | 0.048 |
| H37Rv_KO_SugABC | 1.635 | 1.215 |
| H37Rv_KO_MbtN | 2.769 | 1.726 |
| Trans05 | 3.129 | 1.644 |
| macrophage_unactivated | 1.49 | 0.467 |
| IL1 | -1.797 | -0.756 |
| Rapamycin | -0.166 | -0.641 |
| Tcell | 1.411 | 0.707 |
| GMCSF | -0.23 | 0.483 |
| IFNab | 0.623 | 0.553 |
| IFNg | -0.676 | -1.216 |
| IFNg_GMCSF1 | -0.38 | -1.43 |
| Rv1432_day32 | 2.034 | 0.505 |
| Rv1565c_day32 | -1.219 | -1.579 |
| secA2_input | -0.471 | -1.126 |
| delta_Rv3594 | 0.74 | -0.733 |
| delta_Rv3717 | 1.886 | 0.554 |
| delta_Rv3811 | 1.108 | -0.657 |
| delta_Rv0954 | -1.868 | -0.89 |
| PonA1 | -1.487 | -1.139 |
| EccD1_KO | -1.075 | -2.394 |
| EspI_KO | -0.613 | -1.84 |
| PE35_KO | -1.654 | -1.173 |
| PPE68_KO | -1.494 | -1.286 |
| glycerol2 | 0.551 | -1.868 |
| lignocerate | -0.111 | -0.621 |
| oleate | 0.801 | -0.396 |
| phosphatidylcholine | -0.419 | -1.238 |
| acetate | 0.284 | 0.387 |
| glucAc | 0.006 | -0.082 |
| Rv0950ko | -1.01 | -1.101 |
| Rv1096ko | -1.439 | -1.101 |
| Rv3684ko | -1.061 | -1.461 |
| delta_otsA_trehalose | -0.207 | -0.034 |