Top 10 genes with highest correlation to Rv0491/regX3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.5922) | info on Rv1235/lpqY |
| Rv1789/PPE26 | (cc=0.5904) | info on Rv1789/PPE26 |
| Rv1405c/- | (cc=0.5899) | info on Rv1405c/- |
| Rv3869/eccB1 | (cc=0.5757) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.573) | info on Rv3873/PPE68 |
| Rv3197/- | (cc=0.557) | info on Rv3197/- |
| Rv3882c/eccE1 | (cc=0.5465) | info on Rv3882c/eccE1 |
| Rv3535c/hsaG | (cc=0.5455) | info on Rv3535c/hsaG |
| Rv3559c/- | (cc=0.542) | info on Rv3559c/- |
| Rv0101/nrp | (cc=0.5393) | info on Rv0101/nrp |
Correlation of Rv0491/regX3 with Rv3873/PPE68
Normalized LFCs for Rv0491/regX3:
(description and provenance of datasets)
| Rv0491/regX3 | Rv3873/PPE68 | |
| Fe_supp_jason_reseq | -0.193 | 0.444 |
| low_pH_jason_reseq | -1.236 | -0.403 |
| NO_jason_reseq | 0.945 | -0.662 |
| B6_jason_reseq | -0.114 | -1.598 |
| MHCII_jason_reseq | -1.972 | -1.761 |
| Isoniazid02 | 1.003 | 0.007 |
| Rifampicin4 | -0.16 | -0.087 |
| Ethambutol3 | 0.888 | 0.998 |
| Meropenem3 | -0.032 | 0.111 |
| Vancomycin16 | -0.024 | 0.042 |
| Rv2680_day32 | -1.554 | -0.947 |
| H37Rv_KO_MarP | 0.456 | 0.785 |
| hypoxia_3wks | 0.69 | 0.0 |
| hypoxia_6wks | 0.574 | 0.355 |
| glycerol | 0.127 | -0.165 |
| cholesterol | 0.608 | 0.427 |
| AJ | -1.14 | -4.457 |
| Bibs02 | -0.033 | -4.162 |
| Bibs02c | -0.756 | -3.966 |
| BL6 | -1.385 | -1.83 |
| BL6a | -0.854 | -3.833 |
| BXD01 | -0.951 | -3.063 |
| BXD010 | -0.832 | -1.593 |
| BXD011 | -0.3 | -2.995 |
| BXD03 | -0.987 | -1.332 |
| BXD04 | 0.783 | -3.036 |
| BXD05 | -0.516 | -2.551 |
| BXD06 | -1.548 | -2.48 |
| BXD07 | -0.826 | -3.077 |
| BXD08 | -0.195 | -2.702 |
| BXD09 | -0.808 | -3.224 |
| CAST | -1.458 | -3.615 |
| CCcont | 0.128 | -0.331 |
| DS01 | -0.236 | -2.97 |
| DS02 | 0.342 | -3.375 |
| DS04 | -0.607 | -1.613 |
| DS0c | -0.544 | -3.446 |
| GP01 | -0.543 | -1.776 |
| GP02 | -0.247 | -1.849 |
| GP0c | -0.195 | -0.995 |
| NOD | -0.822 | -2.491 |
| NZO | -0.782 | -5.033 |
| PWK | -1.108 | -3.719 |
| H37Rv_KO_CtpC | -0.069 | -1.427 |
| H37Rv_KO_CtpD | -1.011 | -1.832 |
| H37Rv_KO_Rv1272 | -0.647 | -2.1 |
| H37Rv_KO_SugABC | -0.135 | -0.055 |
| H37Rv_KO_MbtN | -0.399 | -0.169 |
| Trans05 | -0.827 | -1.426 |
| macrophage_unactivated | 0.101 | -0.764 |
| IL1 | 0.062 | -0.027 |
| Rapamycin | 0.626 | 0.454 |
| Tcell | 0.169 | -1.61 |
| GMCSF | 1.323 | -0.095 |
| IFNab | 0.142 | 1.306 |
| IFNg | 0.508 | -0.775 |
| IFNg_GMCSF1 | 1.031 | -0.471 |
| Rv1432_day32 | 1.617 | -1.657 |
| Rv1565c_day32 | -1.046 | -3.574 |
| secA2_input | 0.391 | -0.142 |
| delta_Rv3594 | 0.084 | 0.104 |
| delta_Rv3717 | -0.41 | -0.792 |
| delta_Rv3811 | -0.077 | -0.058 |
| delta_Rv0954 | 0.521 | -0.403 |
| PonA1 | 0.452 | -0.629 |
| EccD1_KO | 0.112 | -0.789 |
| EspI_KO | -0.924 | -0.896 |
| PE35_KO | -0.785 | -6.0 |
| PPE68_KO | -1.091 | -3.516 |
| glycerol2 | 0.967 | 0.418 |
| lignocerate | 1.08 | 0.644 |
| oleate | 0.624 | 0.006 |
| phosphatidylcholine | 0.805 | 0.272 |
| acetate | -0.354 | -0.535 |
| glucAc | 0.45 | 0.108 |
| Rv0950ko | -0.16 | 0.142 |
| Rv1096ko | 0.477 | 0.066 |
| Rv3684ko | 0.115 | 0.344 |
| delta_otsA_trehalose | 0.535 | 0.887 |