Top 10 genes with highest correlation to Rv0491/regX3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.5922) | info on Rv1235/lpqY |
| Rv1789/PPE26 | (cc=0.5904) | info on Rv1789/PPE26 |
| Rv1405c/- | (cc=0.5899) | info on Rv1405c/- |
| Rv3869/eccB1 | (cc=0.5757) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.573) | info on Rv3873/PPE68 |
| Rv3197/- | (cc=0.557) | info on Rv3197/- |
| Rv3882c/eccE1 | (cc=0.5465) | info on Rv3882c/eccE1 |
| Rv3535c/hsaG | (cc=0.5455) | info on Rv3535c/hsaG |
| Rv3559c/- | (cc=0.542) | info on Rv3559c/- |
| Rv0101/nrp | (cc=0.5393) | info on Rv0101/nrp |
Correlation of Rv0491/regX3 with Rv1405c/-
Normalized LFCs for Rv0491/regX3:
(description and provenance of datasets)
| Rv0491/regX3 | Rv1405c/- | |
| Fe_supp_jason_reseq | -0.193 | 0.0 |
| low_pH_jason_reseq | -1.236 | -1.0 |
| NO_jason_reseq | 0.945 | 0.116 |
| B6_jason_reseq | -0.114 | -1.7 |
| MHCII_jason_reseq | -1.972 | -3.452 |
| Isoniazid02 | 1.003 | -0.09 |
| Rifampicin4 | -0.16 | -0.249 |
| Ethambutol3 | 0.888 | -0.154 |
| Meropenem3 | -0.032 | -0.404 |
| Vancomycin16 | -0.024 | 0.011 |
| Rv2680_day32 | -1.554 | -2.352 |
| H37Rv_KO_MarP | 0.456 | 0.388 |
| hypoxia_3wks | 0.69 | 0.199 |
| hypoxia_6wks | 0.574 | -0.14 |
| glycerol | 0.127 | -1.011 |
| cholesterol | 0.608 | -0.51 |
| AJ | -1.14 | -2.546 |
| Bibs02 | -0.033 | -2.874 |
| Bibs02c | -0.756 | -3.031 |
| BL6 | -1.385 | -0.849 |
| BL6a | -0.854 | -2.847 |
| BXD01 | -0.951 | -1.408 |
| BXD010 | -0.832 | -1.154 |
| BXD011 | -0.3 | -1.787 |
| BXD03 | -0.987 | -0.709 |
| BXD04 | 0.783 | -1.668 |
| BXD05 | -0.516 | -1.58 |
| BXD06 | -1.548 | -2.031 |
| BXD07 | -0.826 | -0.865 |
| BXD08 | -0.195 | -1.648 |
| BXD09 | -0.808 | -1.823 |
| CAST | -1.458 | -4.521 |
| CCcont | 0.128 | 0.164 |
| DS01 | -0.236 | -3.112 |
| DS02 | 0.342 | -2.247 |
| DS04 | -0.607 | -2.403 |
| DS0c | -0.544 | -3.556 |
| GP01 | -0.543 | -1.342 |
| GP02 | -0.247 | -1.544 |
| GP0c | -0.195 | 0.143 |
| NOD | -0.822 | -2.086 |
| NZO | -0.782 | -2.913 |
| PWK | -1.108 | -2.911 |
| H37Rv_KO_CtpC | -0.069 | -1.665 |
| H37Rv_KO_CtpD | -1.011 | -1.476 |
| H37Rv_KO_Rv1272 | -0.647 | -1.038 |
| H37Rv_KO_SugABC | -0.135 | -2.355 |
| H37Rv_KO_MbtN | -0.399 | -0.355 |
| Trans05 | -0.827 | -1.833 |
| macrophage_unactivated | 0.101 | 0.455 |
| IL1 | 0.062 | 0.498 |
| Rapamycin | 0.626 | 0.381 |
| Tcell | 0.169 | 0.785 |
| GMCSF | 1.323 | 0.304 |
| IFNab | 0.142 | 0.568 |
| IFNg | 0.508 | 1.074 |
| IFNg_GMCSF1 | 1.031 | -0.201 |
| Rv1432_day32 | 1.617 | -2.768 |
| Rv1565c_day32 | -1.046 | -3.668 |
| secA2_input | 0.391 | 0.41 |
| delta_Rv3594 | 0.084 | -1.065 |
| delta_Rv3717 | -0.41 | -0.643 |
| delta_Rv3811 | -0.077 | -1.124 |
| delta_Rv0954 | 0.521 | -0.119 |
| PonA1 | 0.452 | -0.542 |
| EccD1_KO | 0.112 | -0.273 |
| EspI_KO | -0.924 | -0.599 |
| PE35_KO | -0.785 | -0.347 |
| PPE68_KO | -1.091 | -0.88 |
| glycerol2 | 0.967 | 0.399 |
| lignocerate | 1.08 | 0.704 |
| oleate | 0.624 | 0.678 |
| phosphatidylcholine | 0.805 | 0.769 |
| acetate | -0.354 | -0.101 |
| glucAc | 0.45 | -0.128 |
| Rv0950ko | -0.16 | -0.069 |
| Rv1096ko | 0.477 | 0.235 |
| Rv3684ko | 0.115 | -0.226 |
| delta_otsA_trehalose | 0.535 | 0.088 |