Top 10 genes with highest correlation to Rv0491/regX3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.5922) | info on Rv1235/lpqY |
| Rv1789/PPE26 | (cc=0.5904) | info on Rv1789/PPE26 |
| Rv1405c/- | (cc=0.5899) | info on Rv1405c/- |
| Rv3869/eccB1 | (cc=0.5757) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.573) | info on Rv3873/PPE68 |
| Rv3197/- | (cc=0.557) | info on Rv3197/- |
| Rv3882c/eccE1 | (cc=0.5465) | info on Rv3882c/eccE1 |
| Rv3535c/hsaG | (cc=0.5455) | info on Rv3535c/hsaG |
| Rv3559c/- | (cc=0.542) | info on Rv3559c/- |
| Rv0101/nrp | (cc=0.5393) | info on Rv0101/nrp |
Correlation of Rv0491/regX3 with Rv0101/nrp
Normalized LFCs for Rv0491/regX3:
(description and provenance of datasets)
| Rv0491/regX3 | Rv0101/nrp | |
| Fe_supp_jason_reseq | -0.193 | -0.475 |
| low_pH_jason_reseq | -1.236 | 0.0 |
| NO_jason_reseq | 0.945 | 0.037 |
| B6_jason_reseq | -0.114 | -1.33 |
| MHCII_jason_reseq | -1.972 | -2.431 |
| Isoniazid02 | 1.003 | 0.493 |
| Rifampicin4 | -0.16 | -0.319 |
| Ethambutol3 | 0.888 | 0.604 |
| Meropenem3 | -0.032 | 0.788 |
| Vancomycin16 | -0.024 | -0.154 |
| Rv2680_day32 | -1.554 | -2.166 |
| H37Rv_KO_MarP | 0.456 | 0.257 |
| hypoxia_3wks | 0.69 | 0.06 |
| hypoxia_6wks | 0.574 | 0.0 |
| glycerol | 0.127 | -0.037 |
| cholesterol | 0.608 | 1.361 |
| AJ | -1.14 | -3.82 |
| Bibs02 | -0.033 | -1.358 |
| Bibs02c | -0.756 | -0.732 |
| BL6 | -1.385 | -1.049 |
| BL6a | -0.854 | -1.621 |
| BXD01 | -0.951 | -1.449 |
| BXD010 | -0.832 | -0.882 |
| BXD011 | -0.3 | -1.018 |
| BXD03 | -0.987 | -0.908 |
| BXD04 | 0.783 | -1.14 |
| BXD05 | -0.516 | -0.904 |
| BXD06 | -1.548 | -1.934 |
| BXD07 | -0.826 | -1.08 |
| BXD08 | -0.195 | -0.433 |
| BXD09 | -0.808 | -1.564 |
| CAST | -1.458 | -3.177 |
| CCcont | 0.128 | -0.599 |
| DS01 | -0.236 | 0.337 |
| DS02 | 0.342 | 1.878 |
| DS04 | -0.607 | -1.789 |
| DS0c | -0.544 | -0.226 |
| GP01 | -0.543 | -1.073 |
| GP02 | -0.247 | -1.148 |
| GP0c | -0.195 | -0.149 |
| NOD | -0.822 | -2.023 |
| NZO | -0.782 | -3.664 |
| PWK | -1.108 | -3.066 |
| H37Rv_KO_CtpC | -0.069 | -1.607 |
| H37Rv_KO_CtpD | -1.011 | -0.196 |
| H37Rv_KO_Rv1272 | -0.647 | -0.643 |
| H37Rv_KO_SugABC | -0.135 | 0.527 |
| H37Rv_KO_MbtN | -0.399 | 0.485 |
| Trans05 | -0.827 | -0.73 |
| macrophage_unactivated | 0.101 | 0.786 |
| IL1 | 0.062 | -0.653 |
| Rapamycin | 0.626 | -0.325 |
| Tcell | 0.169 | -0.228 |
| GMCSF | 1.323 | 0.911 |
| IFNab | 0.142 | 1.394 |
| IFNg | 0.508 | 0.219 |
| IFNg_GMCSF1 | 1.031 | 0.408 |
| Rv1432_day32 | 1.617 | -2.588 |
| Rv1565c_day32 | -1.046 | -3.349 |
| secA2_input | 0.391 | 0.348 |
| delta_Rv3594 | 0.084 | -0.257 |
| delta_Rv3717 | -0.41 | -0.045 |
| delta_Rv3811 | -0.077 | 0.152 |
| delta_Rv0954 | 0.521 | 0.152 |
| PonA1 | 0.452 | -1.675 |
| EccD1_KO | 0.112 | -0.132 |
| EspI_KO | -0.924 | -0.188 |
| PE35_KO | -0.785 | -0.155 |
| PPE68_KO | -1.091 | -0.211 |
| glycerol2 | 0.967 | 0.052 |
| lignocerate | 1.08 | -0.222 |
| oleate | 0.624 | -0.352 |
| phosphatidylcholine | 0.805 | -0.286 |
| acetate | -0.354 | -0.032 |
| glucAc | 0.45 | -0.02 |
| Rv0950ko | -0.16 | -0.096 |
| Rv1096ko | 0.477 | 1.028 |
| Rv3684ko | 0.115 | 0.403 |
| delta_otsA_trehalose | 0.535 | 0.119 |