Top 10 genes with highest correlation to Rv0491/regX3:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1235/lpqY | (cc=0.5922) | info on Rv1235/lpqY |
| Rv1789/PPE26 | (cc=0.5904) | info on Rv1789/PPE26 |
| Rv1405c/- | (cc=0.5899) | info on Rv1405c/- |
| Rv3869/eccB1 | (cc=0.5757) | info on Rv3869/eccB1 |
| Rv3873/PPE68 | (cc=0.573) | info on Rv3873/PPE68 |
| Rv3197/- | (cc=0.557) | info on Rv3197/- |
| Rv3882c/eccE1 | (cc=0.5465) | info on Rv3882c/eccE1 |
| Rv3535c/hsaG | (cc=0.5455) | info on Rv3535c/hsaG |
| Rv3559c/- | (cc=0.542) | info on Rv3559c/- |
| Rv0101/nrp | (cc=0.5393) | info on Rv0101/nrp |
Correlation of Rv0491/regX3 with Rv1235/lpqY
Normalized LFCs for Rv0491/regX3:
(description and provenance of datasets)
| Rv0491/regX3 | Rv1235/lpqY | |
| Fe_supp_jason_reseq | -0.193 | -0.923 |
| low_pH_jason_reseq | -1.236 | -0.507 |
| NO_jason_reseq | 0.945 | -0.034 |
| B6_jason_reseq | -0.114 | -1.41 |
| MHCII_jason_reseq | -1.972 | -2.564 |
| Isoniazid02 | 1.003 | -1.036 |
| Rifampicin4 | -0.16 | 0.609 |
| Ethambutol3 | 0.888 | 0.051 |
| Meropenem3 | -0.032 | -1.357 |
| Vancomycin16 | -0.024 | 0.164 |
| Rv2680_day32 | -1.554 | -2.577 |
| H37Rv_KO_MarP | 0.456 | 0.835 |
| hypoxia_3wks | 0.69 | 0.471 |
| hypoxia_6wks | 0.574 | 0.716 |
| glycerol | 0.127 | -0.418 |
| cholesterol | 0.608 | -0.035 |
| AJ | -1.14 | -2.262 |
| Bibs02 | -0.033 | -1.576 |
| Bibs02c | -0.756 | -1.175 |
| BL6 | -1.385 | -1.827 |
| BL6a | -0.854 | -1.458 |
| BXD01 | -0.951 | -1.842 |
| BXD010 | -0.832 | -1.369 |
| BXD011 | -0.3 | -1.801 |
| BXD03 | -0.987 | -2.182 |
| BXD04 | 0.783 | -0.292 |
| BXD05 | -0.516 | -2.172 |
| BXD06 | -1.548 | -1.664 |
| BXD07 | -0.826 | -1.392 |
| BXD08 | -0.195 | -1.658 |
| BXD09 | -0.808 | -1.647 |
| CAST | -1.458 | -3.717 |
| CCcont | 0.128 | -0.331 |
| DS01 | -0.236 | -1.576 |
| DS02 | 0.342 | -1.994 |
| DS04 | -0.607 | -2.927 |
| DS0c | -0.544 | -1.648 |
| GP01 | -0.543 | -1.089 |
| GP02 | -0.247 | -1.39 |
| GP0c | -0.195 | 0.015 |
| NOD | -0.822 | -3.389 |
| NZO | -0.782 | -2.006 |
| PWK | -1.108 | -3.277 |
| H37Rv_KO_CtpC | -0.069 | -1.048 |
| H37Rv_KO_CtpD | -1.011 | -0.5 |
| H37Rv_KO_Rv1272 | -0.647 | -1.653 |
| H37Rv_KO_SugABC | -0.135 | -0.661 |
| H37Rv_KO_MbtN | -0.399 | -0.128 |
| Trans05 | -0.827 | 0.089 |
| macrophage_unactivated | 0.101 | 0.0 |
| IL1 | 0.062 | 1.1 |
| Rapamycin | 0.626 | 0.997 |
| Tcell | 0.169 | -0.244 |
| GMCSF | 1.323 | 0.826 |
| IFNab | 0.142 | 0.692 |
| IFNg | 0.508 | 0.577 |
| IFNg_GMCSF1 | 1.031 | 0.396 |
| Rv1432_day32 | 1.617 | -2.173 |
| Rv1565c_day32 | -1.046 | -1.989 |
| secA2_input | 0.391 | -0.601 |
| delta_Rv3594 | 0.084 | 0.083 |
| delta_Rv3717 | -0.41 | -0.701 |
| delta_Rv3811 | -0.077 | -0.232 |
| delta_Rv0954 | 0.521 | -0.459 |
| PonA1 | 0.452 | -0.111 |
| EccD1_KO | 0.112 | -0.27 |
| EspI_KO | -0.924 | -0.057 |
| PE35_KO | -0.785 | -0.178 |
| PPE68_KO | -1.091 | -0.474 |
| glycerol2 | 0.967 | -0.383 |
| lignocerate | 1.08 | -0.459 |
| oleate | 0.624 | 0.244 |
| phosphatidylcholine | 0.805 | 0.0 |
| acetate | -0.354 | -0.231 |
| glucAc | 0.45 | -0.412 |
| Rv0950ko | -0.16 | 0.329 |
| Rv1096ko | 0.477 | 0.63 |
| Rv3684ko | 0.115 | 0.874 |
| delta_otsA_trehalose | 0.535 | 0.0 |