Top 10 genes with highest correlation to Rv0424c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.4788) | info on Rv0470A/- |
| Rv1592c/- | (cc=0.4569) | info on Rv1592c/- |
| Rv2378c/mbtG | (cc=0.4527) | info on Rv2378c/mbtG |
| Rv2379c/mbtF | (cc=0.4413) | info on Rv2379c/mbtF |
| Rv2564/glnQ | (cc=0.426) | info on Rv2564/glnQ |
| Rv0418/lpqL | (cc=0.4237) | info on Rv0418/lpqL |
| Rv2414c/- | (cc=0.423) | info on Rv2414c/- |
| Rv3574/kstR | (cc=0.421) | info on Rv3574/kstR |
| Rv2681/- | (cc=0.4178) | info on Rv2681/- |
| Rv1682/- | (cc=0.4071) | info on Rv1682/- |
Correlation of Rv0424c/- with Rv2681/-
Normalized LFCs for Rv0424c/-:
(description and provenance of datasets)
| Rv0424c/- | Rv2681/- | |
| Fe_supp_jason_reseq | 0.262 | 1.628 |
| low_pH_jason_reseq | -0.177 | 0.102 |
| NO_jason_reseq | -0.31 | -1.494 |
| B6_jason_reseq | -0.259 | -1.794 |
| MHCII_jason_reseq | -0.091 | 0.06 |
| Isoniazid02 | 0.033 | 1.116 |
| Rifampicin4 | 0.606 | 0.0 |
| Ethambutol3 | 0.105 | -0.528 |
| Meropenem3 | 0.062 | 0.074 |
| Vancomycin16 | 2.178 | -1.804 |
| Rv2680_day32 | -1.779 | -0.971 |
| H37Rv_KO_MarP | -0.261 | 1.769 |
| hypoxia_3wks | -1.212 | -0.969 |
| hypoxia_6wks | 0.311 | -1.355 |
| glycerol | 0.587 | 1.17 |
| cholesterol | -0.289 | -0.141 |
| AJ | 0.163 | -0.901 |
| Bibs02 | -0.612 | -0.624 |
| Bibs02c | -0.832 | -0.873 |
| BL6 | -0.031 | -2.702 |
| BL6a | -0.86 | -1.543 |
| BXD01 | -1.424 | -3.117 |
| BXD010 | -0.645 | -3.065 |
| BXD011 | -0.371 | -2.752 |
| BXD03 | -0.538 | -2.921 |
| BXD04 | -0.521 | -2.49 |
| BXD05 | 0.257 | -2.979 |
| BXD06 | -0.293 | -3.285 |
| BXD07 | -0.503 | -3.407 |
| BXD08 | -0.769 | -3.273 |
| BXD09 | -0.708 | -3.274 |
| CAST | -0.01 | -0.125 |
| CCcont | -0.349 | -1.248 |
| DS01 | 1.049 | 0.713 |
| DS02 | 0.611 | 1.419 |
| DS04 | 0.696 | 0.914 |
| DS0c | 0.044 | 0.369 |
| GP01 | -0.109 | -2.66 |
| GP02 | -0.753 | -2.4 |
| GP0c | -0.179 | -3.503 |
| NOD | -0.199 | -0.029 |
| NZO | -0.142 | -1.342 |
| PWK | 0.611 | 0.473 |
| H37Rv_KO_CtpC | 0.3 | -1.589 |
| H37Rv_KO_CtpD | 1.019 | -0.579 |
| H37Rv_KO_Rv1272 | 1.245 | -2.354 |
| H37Rv_KO_SugABC | 0.349 | -1.995 |
| H37Rv_KO_MbtN | -0.105 | -2.226 |
| Trans05 | 0.168 | -2.413 |
| macrophage_unactivated | -0.776 | -2.702 |
| IL1 | -0.193 | -3.197 |
| Rapamycin | 0.015 | -2.627 |
| Tcell | -0.068 | -2.789 |
| GMCSF | 0.055 | -3.063 |
| IFNab | -0.541 | -3.773 |
| IFNg | -0.029 | -3.1 |
| IFNg_GMCSF1 | -0.452 | -2.275 |
| Rv1432_day32 | -1.394 | -2.117 |
| Rv1565c_day32 | 0.355 | 0.625 |
| secA2_input | -0.529 | 0.518 |
| delta_Rv3594 | -0.655 | -2.518 |
| delta_Rv3717 | -1.574 | -3.253 |
| delta_Rv3811 | -1.532 | -2.858 |
| delta_Rv0954 | 0.401 | -0.079 |
| PonA1 | 0.787 | 0.705 |
| EccD1_KO | 0.293 | -0.066 |
| EspI_KO | 0.493 | 0.217 |
| PE35_KO | 0.219 | 0.432 |
| PPE68_KO | -0.166 | -0.39 |
| glycerol2 | 0.205 | 0.863 |
| lignocerate | 0.533 | -0.242 |
| oleate | 0.374 | -0.846 |
| phosphatidylcholine | 0.478 | 0.731 |
| acetate | 0.281 | 0.15 |
| glucAc | 0.018 | 1.115 |
| Rv0950ko | 0.721 | -0.482 |
| Rv1096ko | -0.106 | -0.57 |
| Rv3684ko | 0.157 | -0.91 |
| delta_otsA_trehalose | -0.269 | 1.041 |