Top 10 genes with highest correlation to Rv0424c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.4788) | info on Rv0470A/- |
| Rv1592c/- | (cc=0.4569) | info on Rv1592c/- |
| Rv2378c/mbtG | (cc=0.4527) | info on Rv2378c/mbtG |
| Rv2379c/mbtF | (cc=0.4413) | info on Rv2379c/mbtF |
| Rv2564/glnQ | (cc=0.426) | info on Rv2564/glnQ |
| Rv0418/lpqL | (cc=0.4237) | info on Rv0418/lpqL |
| Rv2414c/- | (cc=0.423) | info on Rv2414c/- |
| Rv3574/kstR | (cc=0.421) | info on Rv3574/kstR |
| Rv2681/- | (cc=0.4178) | info on Rv2681/- |
| Rv1682/- | (cc=0.4071) | info on Rv1682/- |
Correlation of Rv0424c/- with Rv1592c/-
Normalized LFCs for Rv0424c/-:
(description and provenance of datasets)
| Rv0424c/- | Rv1592c/- | |
| Fe_supp_jason_reseq | 0.262 | -0.06 |
| low_pH_jason_reseq | -0.177 | 0.266 |
| NO_jason_reseq | -0.31 | -4.576 |
| B6_jason_reseq | -0.259 | -2.158 |
| MHCII_jason_reseq | -0.091 | -1.152 |
| Isoniazid02 | 0.033 | 0.671 |
| Rifampicin4 | 0.606 | -3.742 |
| Ethambutol3 | 0.105 | -0.772 |
| Meropenem3 | 0.062 | -1.817 |
| Vancomycin16 | 2.178 | -0.533 |
| Rv2680_day32 | -1.779 | -2.315 |
| H37Rv_KO_MarP | -0.261 | -0.786 |
| hypoxia_3wks | -1.212 | -3.142 |
| hypoxia_6wks | 0.311 | -3.644 |
| glycerol | 0.587 | 2.149 |
| cholesterol | -0.289 | 0.973 |
| AJ | 0.163 | -2.745 |
| Bibs02 | -0.612 | -1.372 |
| Bibs02c | -0.832 | -0.229 |
| BL6 | -0.031 | -2.01 |
| BL6a | -0.86 | -1.522 |
| BXD01 | -1.424 | -3.036 |
| BXD010 | -0.645 | -2.55 |
| BXD011 | -0.371 | -1.577 |
| BXD03 | -0.538 | -2.12 |
| BXD04 | -0.521 | -2.264 |
| BXD05 | 0.257 | -2.218 |
| BXD06 | -0.293 | -2.511 |
| BXD07 | -0.503 | -2.535 |
| BXD08 | -0.769 | -2.502 |
| BXD09 | -0.708 | -2.503 |
| CAST | -0.01 | -1.386 |
| CCcont | -0.349 | 0.216 |
| DS01 | 1.049 | 0.197 |
| DS02 | 0.611 | 0.635 |
| DS04 | 0.696 | 0.528 |
| DS0c | 0.044 | -0.096 |
| GP01 | -0.109 | -2.474 |
| GP02 | -0.753 | -2.168 |
| GP0c | -0.179 | -3.258 |
| NOD | -0.199 | 0.0 |
| NZO | -0.142 | -3.052 |
| PWK | 0.611 | -0.176 |
| H37Rv_KO_CtpC | 0.3 | -0.028 |
| H37Rv_KO_CtpD | 1.019 | 0.639 |
| H37Rv_KO_Rv1272 | 1.245 | -1.871 |
| H37Rv_KO_SugABC | 0.349 | -2.031 |
| H37Rv_KO_MbtN | -0.105 | -1.276 |
| Trans05 | 0.168 | -1.999 |
| macrophage_unactivated | -0.776 | 0.701 |
| IL1 | -0.193 | -0.276 |
| Rapamycin | 0.015 | -0.187 |
| Tcell | -0.068 | 1.352 |
| GMCSF | 0.055 | -1.919 |
| IFNab | -0.541 | -0.907 |
| IFNg | -0.029 | -1.446 |
| IFNg_GMCSF1 | -0.452 | -2.781 |
| Rv1432_day32 | -1.394 | -3.431 |
| Rv1565c_day32 | 0.355 | 1.579 |
| secA2_input | -0.529 | 0.153 |
| delta_Rv3594 | -0.655 | -4.87 |
| delta_Rv3717 | -1.574 | -4.18 |
| delta_Rv3811 | -1.532 | -4.735 |
| delta_Rv0954 | 0.401 | 2.469 |
| PonA1 | 0.787 | 1.943 |
| EccD1_KO | 0.293 | 0.405 |
| EspI_KO | 0.493 | 0.576 |
| PE35_KO | 0.219 | 1.843 |
| PPE68_KO | -0.166 | 1.478 |
| glycerol2 | 0.205 | -2.781 |
| lignocerate | 0.533 | -1.857 |
| oleate | 0.374 | -2.358 |
| phosphatidylcholine | 0.478 | -1.555 |
| acetate | 0.281 | -0.535 |
| glucAc | 0.018 | -0.789 |
| Rv0950ko | 0.721 | 1.493 |
| Rv1096ko | -0.106 | 0.078 |
| Rv3684ko | 0.157 | 0.462 |
| delta_otsA_trehalose | -0.269 | -0.764 |