Top 10 genes with highest correlation to Rv0424c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.4788) | info on Rv0470A/- |
| Rv1592c/- | (cc=0.4569) | info on Rv1592c/- |
| Rv2378c/mbtG | (cc=0.4527) | info on Rv2378c/mbtG |
| Rv2379c/mbtF | (cc=0.4413) | info on Rv2379c/mbtF |
| Rv2564/glnQ | (cc=0.426) | info on Rv2564/glnQ |
| Rv0418/lpqL | (cc=0.4237) | info on Rv0418/lpqL |
| Rv2414c/- | (cc=0.423) | info on Rv2414c/- |
| Rv3574/kstR | (cc=0.421) | info on Rv3574/kstR |
| Rv2681/- | (cc=0.4178) | info on Rv2681/- |
| Rv1682/- | (cc=0.4071) | info on Rv1682/- |
Correlation of Rv0424c/- with Rv2564/glnQ
Normalized LFCs for Rv0424c/-:
(description and provenance of datasets)
| Rv0424c/- | Rv2564/glnQ | |
| Fe_supp_jason_reseq | 0.262 | 2.013 |
| low_pH_jason_reseq | -0.177 | -0.333 |
| NO_jason_reseq | -0.31 | -1.853 |
| B6_jason_reseq | -0.259 | -1.519 |
| MHCII_jason_reseq | -0.091 | -0.932 |
| Isoniazid02 | 0.033 | 0.036 |
| Rifampicin4 | 0.606 | -2.134 |
| Ethambutol3 | 0.105 | 1.918 |
| Meropenem3 | 0.062 | 0.649 |
| Vancomycin16 | 2.178 | -0.578 |
| Rv2680_day32 | -1.779 | -2.923 |
| H37Rv_KO_MarP | -0.261 | 0.621 |
| hypoxia_3wks | -1.212 | -3.038 |
| hypoxia_6wks | 0.311 | -2.011 |
| glycerol | 0.587 | 0.676 |
| cholesterol | -0.289 | 0.44 |
| AJ | 0.163 | -3.514 |
| Bibs02 | -0.612 | -2.262 |
| Bibs02c | -0.832 | 0.652 |
| BL6 | -0.031 | -2.64 |
| BL6a | -0.86 | -1.086 |
| BXD01 | -1.424 | -3.107 |
| BXD010 | -0.645 | -1.829 |
| BXD011 | -0.371 | -2.911 |
| BXD03 | -0.538 | -1.721 |
| BXD04 | -0.521 | -2.264 |
| BXD05 | 0.257 | -3.076 |
| BXD06 | -0.293 | -2.714 |
| BXD07 | -0.503 | -2.716 |
| BXD08 | -0.769 | -2.704 |
| BXD09 | -0.708 | -3.352 |
| CAST | -0.01 | -0.429 |
| CCcont | -0.349 | 0.355 |
| DS01 | 1.049 | 2.322 |
| DS02 | 0.611 | 0.607 |
| DS04 | 0.696 | 2.805 |
| DS0c | 0.044 | 1.673 |
| GP01 | -0.109 | -2.355 |
| GP02 | -0.753 | -1.985 |
| GP0c | -0.179 | -3.102 |
| NOD | -0.199 | 0.552 |
| NZO | -0.142 | -2.766 |
| PWK | 0.611 | 1.212 |
| H37Rv_KO_CtpC | 0.3 | -0.95 |
| H37Rv_KO_CtpD | 1.019 | -0.764 |
| H37Rv_KO_Rv1272 | 1.245 | -1.846 |
| H37Rv_KO_SugABC | 0.349 | -1.5 |
| H37Rv_KO_MbtN | -0.105 | -1.952 |
| Trans05 | 0.168 | -2.986 |
| macrophage_unactivated | -0.776 | 0.947 |
| IL1 | -0.193 | -1.818 |
| Rapamycin | 0.015 | -0.543 |
| Tcell | -0.068 | 0.0 |
| GMCSF | 0.055 | 0.671 |
| IFNab | -0.541 | 0.163 |
| IFNg | -0.029 | -1.013 |
| IFNg_GMCSF1 | -0.452 | -0.179 |
| Rv1432_day32 | -1.394 | -3.206 |
| Rv1565c_day32 | 0.355 | -0.509 |
| secA2_input | -0.529 | -1.198 |
| delta_Rv3594 | -0.655 | -2.272 |
| delta_Rv3717 | -1.574 | -1.869 |
| delta_Rv3811 | -1.532 | -1.817 |
| delta_Rv0954 | 0.401 | 1.292 |
| PonA1 | 0.787 | 2.505 |
| EccD1_KO | 0.293 | 0.0 |
| EspI_KO | 0.493 | -0.274 |
| PE35_KO | 0.219 | 1.126 |
| PPE68_KO | -0.166 | 0.816 |
| glycerol2 | 0.205 | -1.572 |
| lignocerate | 0.533 | -0.049 |
| oleate | 0.374 | -2.139 |
| phosphatidylcholine | 0.478 | -0.874 |
| acetate | 0.281 | 1.119 |
| glucAc | 0.018 | 0.357 |
| Rv0950ko | 0.721 | 1.414 |
| Rv1096ko | -0.106 | 0.549 |
| Rv3684ko | 0.157 | 0.088 |
| delta_otsA_trehalose | -0.269 | 1.289 |