Top 10 genes with highest correlation to Rv0081/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3535c/hsaG | (cc=0.5361) | info on Rv3535c/hsaG |
| Rv3873/PPE68 | (cc=0.5335) | info on Rv3873/PPE68 |
| Rv3874/esxB | (cc=0.5291) | info on Rv3874/esxB |
| Rv1405c/- | (cc=0.5291) | info on Rv1405c/- |
| Rv3616c/espA | (cc=0.5245) | info on Rv3616c/espA |
| Rv3877/eccD1 | (cc=0.5237) | info on Rv3877/eccD1 |
| Rv3551/- | (cc=0.5157) | info on Rv3551/- |
| Rv3534c/hsaF | (cc=0.5132) | info on Rv3534c/hsaF |
| Rv1589/bioB | (cc=0.5109) | info on Rv1589/bioB |
| Rv3871/eccCb1 | (cc=0.5051) | info on Rv3871/eccCb1 |
Correlation of Rv0081/- with Rv3535c/hsaG
Normalized LFCs for Rv0081/-:
(description and provenance of datasets)
| Rv0081/- | Rv3535c/hsaG | |
| Fe_supp_jason_reseq | 0.374 | -0.714 |
| low_pH_jason_reseq | -0.293 | -0.299 |
| NO_jason_reseq | -0.37 | -0.155 |
| B6_jason_reseq | 0.48 | -1.901 |
| MHCII_jason_reseq | 1.017 | -1.377 |
| Isoniazid02 | -0.292 | 0.869 |
| Rifampicin4 | -0.114 | -0.051 |
| Ethambutol3 | 0.788 | 1.612 |
| Meropenem3 | -0.059 | 0.313 |
| Vancomycin16 | -0.17 | -0.202 |
| Rv2680_day32 | 0.228 | -1.643 |
| H37Rv_KO_MarP | 0.082 | 0.198 |
| hypoxia_3wks | -0.259 | 0.132 |
| hypoxia_6wks | 0.699 | -0.198 |
| glycerol | 0.432 | -0.342 |
| cholesterol | 0.195 | -1.975 |
| AJ | -1.129 | -1.632 |
| Bibs02 | -1.599 | -1.017 |
| Bibs02c | -0.147 | -0.668 |
| BL6 | -0.169 | -0.999 |
| BL6a | -0.24 | -1.033 |
| BXD01 | -0.234 | -1.42 |
| BXD010 | -0.649 | -0.589 |
| BXD011 | 0.027 | -1.777 |
| BXD03 | 0.192 | -0.471 |
| BXD04 | -0.381 | -0.881 |
| BXD05 | -0.682 | -2.219 |
| BXD06 | -0.247 | -1.167 |
| BXD07 | 0.128 | -1.057 |
| BXD08 | 0.342 | -1.112 |
| BXD09 | 0.179 | -1.516 |
| CAST | -0.632 | -2.177 |
| CCcont | 0.116 | -0.138 |
| DS01 | -0.936 | -2.135 |
| DS02 | -0.424 | -0.009 |
| DS04 | -0.609 | -2.586 |
| DS0c | -2.555 | -2.264 |
| GP01 | -0.754 | -1.46 |
| GP02 | -0.606 | -0.506 |
| GP0c | 0.39 | -0.182 |
| NOD | -1.172 | -2.397 |
| NZO | -0.958 | -1.097 |
| PWK | -0.969 | -2.39 |
| H37Rv_KO_CtpC | -1.771 | -2.141 |
| H37Rv_KO_CtpD | -1.21 | -0.583 |
| H37Rv_KO_Rv1272 | -0.816 | -1.289 |
| H37Rv_KO_SugABC | -0.272 | 0.033 |
| H37Rv_KO_MbtN | 0.929 | -0.635 |
| Trans05 | 0.224 | -0.952 |
| macrophage_unactivated | -0.148 | 0.319 |
| IL1 | 0.282 | 0.664 |
| Rapamycin | -0.448 | 0.387 |
| Tcell | 1.043 | -0.45 |
| GMCSF | 1.059 | 0.018 |
| IFNab | -0.088 | -0.06 |
| IFNg | -0.19 | 0.446 |
| IFNg_GMCSF1 | -0.072 | -0.342 |
| Rv1432_day32 | -0.932 | -1.352 |
| Rv1565c_day32 | -0.455 | -2.06 |
| secA2_input | 0.46 | 1.296 |
| delta_Rv3594 | -0.944 | 0.125 |
| delta_Rv3717 | 0.268 | 0.216 |
| delta_Rv3811 | -0.074 | 0.393 |
| delta_Rv0954 | 0.411 | 0.358 |
| PonA1 | -0.749 | 0.391 |
| EccD1_KO | -0.71 | -0.911 |
| EspI_KO | 0.148 | -0.368 |
| PE35_KO | -0.767 | -0.053 |
| PPE68_KO | -0.518 | -0.134 |
| glycerol2 | 0.817 | 0.97 |
| lignocerate | 0.83 | 1.54 |
| oleate | 0.43 | -0.228 |
| phosphatidylcholine | 0.399 | 0.933 |
| acetate | 1.955 | 1.275 |
| glucAc | 0.023 | 1.344 |
| Rv0950ko | 0.645 | 0.66 |
| Rv1096ko | 0.676 | 0.624 |
| Rv3684ko | 0.734 | 1.13 |
| delta_otsA_trehalose | 1.207 | 0.54 |