Top 10 genes with highest correlation to Rv0080/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1180/pks3 | (cc=0.634) | info on Rv1180/pks3 |
| Rv3401/- | (cc=0.6148) | info on Rv3401/- |
| Rv0228/- | (cc=0.6048) | info on Rv0228/- |
| Rv0359/- | (cc=0.5985) | info on Rv0359/- |
| Rv2681/- | (cc=0.5914) | info on Rv2681/- |
| Rv3328c/sigJ | (cc=0.5856) | info on Rv3328c/sigJ |
| Rv1323/fadA4 | (cc=0.5808) | info on Rv1323/fadA4 |
| Rv1864c/- | (cc=0.5798) | info on Rv1864c/- |
| Rv3605c/- | (cc=0.5763) | info on Rv3605c/- |
| Rv2636/- | (cc=0.5705) | info on Rv2636/- |
Correlation of Rv0080/- with Rv3605c/-
Normalized LFCs for Rv0080/-:
(description and provenance of datasets)
| Rv0080/- | Rv3605c/- | |
| Fe_supp_jason_reseq | 0.9 | -0.088 |
| low_pH_jason_reseq | 0.023 | -0.654 |
| NO_jason_reseq | 0.79 | 0.016 |
| B6_jason_reseq | 1.457 | 0.711 |
| MHCII_jason_reseq | 1.207 | 0.726 |
| Isoniazid02 | -0.457 | -0.122 |
| Rifampicin4 | 0.625 | 0.498 |
| Ethambutol3 | 0.019 | 0.173 |
| Meropenem3 | 0.444 | -0.329 |
| Vancomycin16 | -0.17 | 0.777 |
| Rv2680_day32 | -0.528 | -0.008 |
| H37Rv_KO_MarP | 0.406 | 0.096 |
| hypoxia_3wks | -0.299 | -0.618 |
| hypoxia_6wks | -0.088 | -0.15 |
| glycerol | 0.323 | -0.25 |
| cholesterol | 0.639 | -1.077 |
| AJ | -0.83 | -0.281 |
| Bibs02 | 0.293 | 0.212 |
| Bibs02c | 0.671 | -0.291 |
| BL6 | -1.359 | -0.535 |
| BL6a | -0.496 | -1.472 |
| BXD01 | -2.397 | -1.207 |
| BXD010 | -3.903 | -0.783 |
| BXD011 | -0.923 | -1.413 |
| BXD03 | -2.024 | -0.391 |
| BXD04 | -1.101 | -0.738 |
| BXD05 | -2.194 | -1.6 |
| BXD06 | -2.074 | -0.395 |
| BXD07 | -1.874 | -0.873 |
| BXD08 | -2.972 | -0.574 |
| BXD09 | -2.886 | -0.432 |
| CAST | 0.888 | -0.107 |
| CCcont | -3.139 | -0.83 |
| DS01 | 0.664 | -0.149 |
| DS02 | 0.304 | -0.829 |
| DS04 | -0.649 | 0.537 |
| DS0c | 0.514 | 0.024 |
| GP01 | -0.1 | 0.044 |
| GP02 | -0.245 | 1.157 |
| GP0c | -0.842 | -0.5 |
| NOD | 0.802 | -0.168 |
| NZO | -0.78 | -0.184 |
| PWK | 0.496 | 0.401 |
| H37Rv_KO_CtpC | -0.917 | -0.464 |
| H37Rv_KO_CtpD | 0.246 | 0.558 |
| H37Rv_KO_Rv1272 | -1.908 | -2.501 |
| H37Rv_KO_SugABC | -2.301 | -2.054 |
| H37Rv_KO_MbtN | -0.418 | 0.099 |
| Trans05 | -3.831 | -1.565 |
| macrophage_unactivated | -1.869 | -0.275 |
| IL1 | -1.634 | -0.801 |
| Rapamycin | -1.568 | -0.384 |
| Tcell | -1.118 | -0.31 |
| GMCSF | -2.867 | -1.04 |
| IFNab | 0.323 | 0.085 |
| IFNg | -2.186 | -1.128 |
| IFNg_GMCSF1 | 1.046 | 0.54 |
| Rv1432_day32 | 1.068 | 0.974 |
| Rv1565c_day32 | 2.105 | 1.085 |
| secA2_input | 0.684 | 1.572 |
| delta_Rv3594 | -1.398 | -0.74 |
| delta_Rv3717 | -0.278 | -1.252 |
| delta_Rv3811 | -0.471 | -0.962 |
| delta_Rv0954 | -0.168 | -0.636 |
| PonA1 | 0.185 | 0.564 |
| EccD1_KO | 0.22 | 0.151 |
| EspI_KO | 0.191 | 0.565 |
| PE35_KO | -1.178 | -0.023 |
| PPE68_KO | -0.768 | 0.928 |
| glycerol2 | -0.429 | 0.93 |
| lignocerate | -0.726 | 0.066 |
| oleate | -1.035 | 0.584 |
| phosphatidylcholine | -0.542 | 0.959 |
| acetate | 0.136 | 2.482 |
| glucAc | 0.434 | 1.134 |
| Rv0950ko | 0.25 | 0.455 |
| Rv1096ko | 0.25 | 0.869 |
| Rv3684ko | -0.246 | 0.354 |
| delta_otsA_trehalose | -1.073 | 0.372 |