Top 10 genes with highest correlation to Rv0080/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1180/pks3 | (cc=0.634) | info on Rv1180/pks3 |
| Rv3401/- | (cc=0.6148) | info on Rv3401/- |
| Rv0228/- | (cc=0.6048) | info on Rv0228/- |
| Rv0359/- | (cc=0.5985) | info on Rv0359/- |
| Rv2681/- | (cc=0.5914) | info on Rv2681/- |
| Rv3328c/sigJ | (cc=0.5856) | info on Rv3328c/sigJ |
| Rv1323/fadA4 | (cc=0.5808) | info on Rv1323/fadA4 |
| Rv1864c/- | (cc=0.5798) | info on Rv1864c/- |
| Rv3605c/- | (cc=0.5763) | info on Rv3605c/- |
| Rv2636/- | (cc=0.5705) | info on Rv2636/- |
Correlation of Rv0080/- with Rv1323/fadA4
Normalized LFCs for Rv0080/-:
(description and provenance of datasets)
| Rv0080/- | Rv1323/fadA4 | |
| Fe_supp_jason_reseq | 0.9 | -0.66 |
| low_pH_jason_reseq | 0.023 | 0.457 |
| NO_jason_reseq | 0.79 | -1.097 |
| B6_jason_reseq | 1.457 | -0.71 |
| MHCII_jason_reseq | 1.207 | 0.604 |
| Isoniazid02 | -0.457 | 1.058 |
| Rifampicin4 | 0.625 | 0.425 |
| Ethambutol3 | 0.019 | 1.045 |
| Meropenem3 | 0.444 | 1.236 |
| Vancomycin16 | -0.17 | 0.982 |
| Rv2680_day32 | -0.528 | -0.734 |
| H37Rv_KO_MarP | 0.406 | 0.885 |
| hypoxia_3wks | -0.299 | -0.502 |
| hypoxia_6wks | -0.088 | -1.462 |
| glycerol | 0.323 | -0.047 |
| cholesterol | 0.639 | 0.055 |
| AJ | -0.83 | -0.376 |
| Bibs02 | 0.293 | -0.121 |
| Bibs02c | 0.671 | -0.02 |
| BL6 | -1.359 | -2.727 |
| BL6a | -0.496 | -1.342 |
| BXD01 | -2.397 | -2.864 |
| BXD010 | -3.903 | -2.137 |
| BXD011 | -0.923 | -3.063 |
| BXD03 | -2.024 | -2.196 |
| BXD04 | -1.101 | -2.652 |
| BXD05 | -2.194 | -2.511 |
| BXD06 | -2.074 | -2.77 |
| BXD07 | -1.874 | -2.721 |
| BXD08 | -2.972 | -3.027 |
| BXD09 | -2.886 | -2.917 |
| CAST | 0.888 | -0.868 |
| CCcont | -3.139 | -1.199 |
| DS01 | 0.664 | -0.592 |
| DS02 | 0.304 | -0.121 |
| DS04 | -0.649 | -1.566 |
| DS0c | 0.514 | -0.596 |
| GP01 | -0.1 | -1.94 |
| GP02 | -0.245 | -2.603 |
| GP0c | -0.842 | -3.04 |
| NOD | 0.802 | 0.628 |
| NZO | -0.78 | -1.753 |
| PWK | 0.496 | -0.521 |
| H37Rv_KO_CtpC | -0.917 | 0.172 |
| H37Rv_KO_CtpD | 0.246 | -0.962 |
| H37Rv_KO_Rv1272 | -1.908 | -2.119 |
| H37Rv_KO_SugABC | -2.301 | -0.711 |
| H37Rv_KO_MbtN | -0.418 | -1.156 |
| Trans05 | -3.831 | -1.482 |
| macrophage_unactivated | -1.869 | -1.496 |
| IL1 | -1.634 | -1.062 |
| Rapamycin | -1.568 | -1.495 |
| Tcell | -1.118 | -0.746 |
| GMCSF | -2.867 | -1.545 |
| IFNab | 0.323 | -1.433 |
| IFNg | -2.186 | -1.721 |
| IFNg_GMCSF1 | 1.046 | -0.377 |
| Rv1432_day32 | 1.068 | -0.724 |
| Rv1565c_day32 | 2.105 | 0.697 |
| secA2_input | 0.684 | 0.473 |
| delta_Rv3594 | -1.398 | 0.34 |
| delta_Rv3717 | -0.278 | -0.313 |
| delta_Rv3811 | -0.471 | 0.034 |
| delta_Rv0954 | -0.168 | 0.643 |
| PonA1 | 0.185 | 0.291 |
| EccD1_KO | 0.22 | 0.421 |
| EspI_KO | 0.191 | -0.051 |
| PE35_KO | -1.178 | 0.251 |
| PPE68_KO | -0.768 | 0.275 |
| glycerol2 | -0.429 | 0.586 |
| lignocerate | -0.726 | 1.196 |
| oleate | -1.035 | 0.303 |
| phosphatidylcholine | -0.542 | 0.847 |
| acetate | 0.136 | 0.74 |
| glucAc | 0.434 | 0.642 |
| Rv0950ko | 0.25 | 0.431 |
| Rv1096ko | 0.25 | 0.676 |
| Rv3684ko | -0.246 | 0.056 |
| delta_otsA_trehalose | -1.073 | -1.023 |