Top 10 genes with highest correlation to Rv0036c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1992c/ctpG | (cc=0.5606) | info on Rv1992c/ctpG |
| Rv2831/echA16 | (cc=0.5496) | info on Rv2831/echA16 |
| Rv2811/- | (cc=0.5483) | info on Rv2811/- |
| Rv1839c/vapB13 | (cc=0.522) | info on Rv1839c/vapB13 |
| Rv0133/- | (cc=0.5195) | info on Rv0133/- |
| Rv1936/- | (cc=0.5057) | info on Rv1936/- |
| Rv1773c/- | (cc=0.5039) | info on Rv1773c/- |
| Rv2174/mptA | (cc=0.4965) | info on Rv2174/mptA |
| Rv2913c/- | (cc=0.4864) | info on Rv2913c/- |
| Rv2917/- | (cc=0.4797) | info on Rv2917/- |
Correlation of Rv0036c/- with Rv2174/mptA
Normalized LFCs for Rv0036c/-:
(description and provenance of datasets)
| Rv0036c/- | Rv2174/mptA | |
| Fe_supp_jason_reseq | -0.346 | 1.07 |
| low_pH_jason_reseq | -1.297 | -0.539 |
| NO_jason_reseq | 0.202 | 0.244 |
| B6_jason_reseq | 0.25 | 0.685 |
| MHCII_jason_reseq | 0.134 | 0.406 |
| Isoniazid02 | 0.652 | 0.23 |
| Rifampicin4 | 0.717 | -0.653 |
| Ethambutol3 | 1.378 | 0.841 |
| Meropenem3 | 0.537 | -0.951 |
| Vancomycin16 | 0.873 | -0.47 |
| Rv2680_day32 | -3.314 | -1.824 |
| H37Rv_KO_MarP | 0.148 | -0.073 |
| hypoxia_3wks | 0.463 | 1.013 |
| hypoxia_6wks | -0.969 | -0.119 |
| glycerol | 1.205 | 0.0 |
| cholesterol | 0.106 | 0.154 |
| AJ | 0.304 | 0.0 |
| Bibs02 | 0.229 | -0.376 |
| Bibs02c | 0.653 | 0.152 |
| BL6 | -1.378 | -0.315 |
| BL6a | -0.296 | -0.595 |
| BXD01 | -1.055 | -0.154 |
| BXD010 | -1.216 | -0.519 |
| BXD011 | 0.465 | -1.021 |
| BXD03 | -1.212 | -0.624 |
| BXD04 | -0.4 | -0.992 |
| BXD05 | -0.13 | -0.405 |
| BXD06 | -0.199 | -0.967 |
| BXD07 | -0.133 | -1.003 |
| BXD08 | -0.436 | -1.177 |
| BXD09 | -0.657 | -0.422 |
| CAST | -0.901 | 0.0 |
| CCcont | -1.863 | -0.779 |
| DS01 | 0.375 | 0.479 |
| DS02 | 0.403 | -0.257 |
| DS04 | -0.18 | -0.312 |
| DS0c | -0.38 | -0.082 |
| GP01 | 1.587 | 0.769 |
| GP02 | 0.505 | -0.134 |
| GP0c | 0.469 | 0.815 |
| NOD | -0.633 | -0.675 |
| NZO | -0.22 | -0.41 |
| PWK | 0.47 | -0.074 |
| H37Rv_KO_CtpC | -0.298 | 0.118 |
| H37Rv_KO_CtpD | -0.256 | -1.237 |
| H37Rv_KO_Rv1272 | -0.716 | -1.248 |
| H37Rv_KO_SugABC | 0.088 | 0.699 |
| H37Rv_KO_MbtN | 0.111 | 0.209 |
| Trans05 | 0.164 | -0.21 |
| macrophage_unactivated | -0.3 | -0.234 |
| IL1 | -0.599 | -0.955 |
| Rapamycin | 0.681 | -1.274 |
| Tcell | -1.111 | -0.762 |
| GMCSF | 0.945 | -1.096 |
| IFNab | 0.033 | 0.0 |
| IFNg | -0.834 | -0.861 |
| IFNg_GMCSF1 | 0.493 | -1.012 |
| Rv1432_day32 | 0.379 | -0.222 |
| Rv1565c_day32 | 0.479 | 0.0 |
| secA2_input | 0.459 | 0.675 |
| delta_Rv3594 | 0.33 | 1.366 |
| delta_Rv3717 | 0.886 | 1.384 |
| delta_Rv3811 | -0.159 | 2.357 |
| delta_Rv0954 | 1.416 | 0.925 |
| PonA1 | 0.263 | 0.419 |
| EccD1_KO | -0.082 | 1.365 |
| EspI_KO | -1.112 | -1.035 |
| PE35_KO | 0.365 | 1.21 |
| PPE68_KO | 0.49 | 1.133 |
| glycerol2 | -0.376 | -0.231 |
| lignocerate | -1.436 | -0.913 |
| oleate | -0.451 | 0.159 |
| phosphatidylcholine | -0.784 | -0.171 |
| acetate | -2.018 | -1.358 |
| glucAc | -2.881 | -1.809 |
| Rv0950ko | 0.075 | 0.211 |
| Rv1096ko | -0.178 | -0.706 |
| Rv3684ko | 0.285 | -1.055 |
| delta_otsA_trehalose | 0.786 | -0.254 |