Top 10 genes with highest correlation to Rv0024/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5636) | info on Rv2980/- |
| Rv2426c/- | (cc=0.5343) | info on Rv2426c/- |
| Rv2378c/mbtG | (cc=0.5287) | info on Rv2378c/mbtG |
| Rv0964c/- | (cc=0.5137) | info on Rv0964c/- |
| Rv2474c/- | (cc=0.5114) | info on Rv2474c/- |
| Rv2599/- | (cc=0.5021) | info on Rv2599/- |
| Rv3056/dinP | (cc=0.4985) | info on Rv3056/dinP |
| Rv3536c/hsaE | (cc=0.4967) | info on Rv3536c/hsaE |
| Rv2380c/mbtE | (cc=0.4928) | info on Rv2380c/mbtE |
| Rv3058c/- | (cc=0.4896) | info on Rv3058c/- |
Correlation of Rv0024/- with Rv3536c/hsaE
Normalized LFCs for Rv0024/-:
(description and provenance of datasets)
| Rv0024/- | Rv3536c/hsaE | |
| Fe_supp_jason_reseq | -0.485 | -0.742 |
| low_pH_jason_reseq | 0.049 | -1.415 |
| NO_jason_reseq | -0.68 | 0.194 |
| B6_jason_reseq | 0.136 | -2.137 |
| MHCII_jason_reseq | 0.111 | -1.408 |
| Isoniazid02 | -0.175 | -1.716 |
| Rifampicin4 | 0.135 | -0.306 |
| Ethambutol3 | 0.461 | -1.346 |
| Meropenem3 | -0.555 | -0.452 |
| Vancomycin16 | -0.43 | -1.313 |
| Rv2680_day32 | -0.965 | -2.328 |
| H37Rv_KO_MarP | 0.785 | 0.442 |
| hypoxia_3wks | -0.044 | -0.722 |
| hypoxia_6wks | -0.487 | -0.221 |
| glycerol | 0.369 | 0.506 |
| cholesterol | 0.249 | -2.019 |
| AJ | -0.261 | -2.664 |
| Bibs02 | 0.384 | -0.412 |
| Bibs02c | -0.362 | -1.1 |
| BL6 | -1.094 | -1.091 |
| BL6a | 0.013 | -2.323 |
| BXD01 | -0.773 | -1.088 |
| BXD010 | -0.116 | -2.563 |
| BXD011 | -0.403 | -1.064 |
| BXD03 | 0.263 | -1.284 |
| BXD04 | 0.176 | -1.649 |
| BXD05 | -0.036 | -2.149 |
| BXD06 | -0.307 | -1.989 |
| BXD07 | -0.115 | -0.746 |
| BXD08 | -0.19 | -1.527 |
| BXD09 | -0.288 | -1.795 |
| CAST | -0.399 | -1.004 |
| CCcont | -0.688 | 0.183 |
| DS01 | 0.152 | -1.889 |
| DS02 | 0.221 | -0.446 |
| DS04 | -0.43 | -0.822 |
| DS0c | -0.891 | -0.203 |
| GP01 | -0.476 | -2.45 |
| GP02 | -0.565 | -1.931 |
| GP0c | 0.163 | -1.591 |
| NOD | 0.423 | -0.871 |
| NZO | 0.214 | 0.244 |
| PWK | 0.151 | -2.561 |
| H37Rv_KO_CtpC | -0.347 | -1.787 |
| H37Rv_KO_CtpD | 0.93 | 0.117 |
| H37Rv_KO_Rv1272 | -0.459 | -0.375 |
| H37Rv_KO_SugABC | 0.534 | 0.538 |
| H37Rv_KO_MbtN | -0.713 | -1.725 |
| Trans05 | -0.921 | -0.334 |
| macrophage_unactivated | -0.436 | 0.338 |
| IL1 | -0.475 | -1.183 |
| Rapamycin | -1.019 | -0.976 |
| Tcell | -0.277 | -1.235 |
| GMCSF | -0.224 | -1.109 |
| IFNab | -0.925 | -0.729 |
| IFNg | -0.15 | -0.219 |
| IFNg_GMCSF1 | -0.456 | -0.584 |
| Rv1432_day32 | -0.125 | -0.692 |
| Rv1565c_day32 | -0.175 | -2.958 |
| secA2_input | 0.726 | -0.031 |
| delta_Rv3594 | -0.665 | -0.711 |
| delta_Rv3717 | -0.715 | -0.123 |
| delta_Rv3811 | -0.922 | -0.378 |
| delta_Rv0954 | 0.076 | 0.937 |
| PonA1 | 0.361 | -0.367 |
| EccD1_KO | 1.72 | 1.98 |
| EspI_KO | 0.607 | 0.696 |
| PE35_KO | 1.21 | 1.348 |
| PPE68_KO | 1.593 | 0.534 |
| glycerol2 | 0.513 | 2.028 |
| lignocerate | 0.776 | 2.762 |
| oleate | 0.335 | -2.069 |
| phosphatidylcholine | 0.443 | 1.548 |
| acetate | 1.716 | 1.589 |
| glucAc | 1.099 | 1.937 |
| Rv0950ko | 1.028 | -0.582 |
| Rv1096ko | 0.576 | 0.697 |
| Rv3684ko | 0.305 | 0.838 |
| delta_otsA_trehalose | -0.356 | -1.134 |