Top 10 genes with highest correlation to Rv0024/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5636) | info on Rv2980/- |
| Rv2426c/- | (cc=0.5343) | info on Rv2426c/- |
| Rv2378c/mbtG | (cc=0.5287) | info on Rv2378c/mbtG |
| Rv0964c/- | (cc=0.5137) | info on Rv0964c/- |
| Rv2474c/- | (cc=0.5114) | info on Rv2474c/- |
| Rv2599/- | (cc=0.5021) | info on Rv2599/- |
| Rv3056/dinP | (cc=0.4985) | info on Rv3056/dinP |
| Rv3536c/hsaE | (cc=0.4967) | info on Rv3536c/hsaE |
| Rv2380c/mbtE | (cc=0.4928) | info on Rv2380c/mbtE |
| Rv3058c/- | (cc=0.4896) | info on Rv3058c/- |
Correlation of Rv0024/- with Rv2474c/-
Normalized LFCs for Rv0024/-:
(description and provenance of datasets)
| Rv0024/- | Rv2474c/- | |
| Fe_supp_jason_reseq | -0.485 | -1.07 |
| low_pH_jason_reseq | 0.049 | 1.491 |
| NO_jason_reseq | -0.68 | -4.949 |
| B6_jason_reseq | 0.136 | -2.511 |
| MHCII_jason_reseq | 0.111 | -1.549 |
| Isoniazid02 | -0.175 | 2.023 |
| Rifampicin4 | 0.135 | 0.133 |
| Ethambutol3 | 0.461 | -0.062 |
| Meropenem3 | -0.555 | -0.558 |
| Vancomycin16 | -0.43 | 0.608 |
| Rv2680_day32 | -0.965 | -2.225 |
| H37Rv_KO_MarP | 0.785 | -0.34 |
| hypoxia_3wks | -0.044 | -0.411 |
| hypoxia_6wks | -0.487 | 0.814 |
| glycerol | 0.369 | -0.186 |
| cholesterol | 0.249 | -0.359 |
| AJ | -0.261 | -3.466 |
| Bibs02 | 0.384 | -1.298 |
| Bibs02c | -0.362 | -3.259 |
| BL6 | -1.094 | -2.563 |
| BL6a | 0.013 | -3.514 |
| BXD01 | -0.773 | -2.668 |
| BXD010 | -0.116 | -2.624 |
| BXD011 | -0.403 | -2.609 |
| BXD03 | 0.263 | -2.77 |
| BXD04 | 0.176 | -2.533 |
| BXD05 | -0.036 | -2.757 |
| BXD06 | -0.307 | -2.601 |
| BXD07 | -0.115 | -2.837 |
| BXD08 | -0.19 | -2.725 |
| BXD09 | -0.288 | -2.879 |
| CAST | -0.399 | -2.074 |
| CCcont | -0.688 | -1.017 |
| DS01 | 0.152 | -3.006 |
| DS02 | 0.221 | -1.884 |
| DS04 | -0.43 | -2.469 |
| DS0c | -0.891 | -0.706 |
| GP01 | -0.476 | -2.023 |
| GP02 | -0.565 | -1.705 |
| GP0c | 0.163 | -2.664 |
| NOD | 0.423 | -1.289 |
| NZO | 0.214 | -3.241 |
| PWK | 0.151 | -1.177 |
| H37Rv_KO_CtpC | -0.347 | -2.53 |
| H37Rv_KO_CtpD | 0.93 | -0.863 |
| H37Rv_KO_Rv1272 | -0.459 | -2.62 |
| H37Rv_KO_SugABC | 0.534 | -1.757 |
| H37Rv_KO_MbtN | -0.713 | -1.749 |
| Trans05 | -0.921 | -1.952 |
| macrophage_unactivated | -0.436 | -4.744 |
| IL1 | -0.475 | -4.458 |
| Rapamycin | -1.019 | -4.612 |
| Tcell | -0.277 | -3.848 |
| GMCSF | -0.224 | -3.662 |
| IFNab | -0.925 | -4.193 |
| IFNg | -0.15 | -4.017 |
| IFNg_GMCSF1 | -0.456 | -4.723 |
| Rv1432_day32 | -0.125 | 0.0 |
| Rv1565c_day32 | -0.175 | -1.703 |
| secA2_input | 0.726 | -0.348 |
| delta_Rv3594 | -0.665 | 0.428 |
| delta_Rv3717 | -0.715 | -0.438 |
| delta_Rv3811 | -0.922 | -0.518 |
| delta_Rv0954 | 0.076 | 1.91 |
| PonA1 | 0.361 | 2.086 |
| EccD1_KO | 1.72 | -0.296 |
| EspI_KO | 0.607 | 0.582 |
| PE35_KO | 1.21 | 1.397 |
| PPE68_KO | 1.593 | 1.43 |
| glycerol2 | 0.513 | 1.794 |
| lignocerate | 0.776 | 1.845 |
| oleate | 0.335 | 0.625 |
| phosphatidylcholine | 0.443 | 1.541 |
| acetate | 1.716 | 1.983 |
| glucAc | 1.099 | 1.806 |
| Rv0950ko | 1.028 | -0.691 |
| Rv1096ko | 0.576 | -1.004 |
| Rv3684ko | 0.305 | 1.11 |
| delta_otsA_trehalose | -0.356 | 0.0 |