Top 10 genes with highest correlation to Rv0024/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5636) | info on Rv2980/- |
| Rv2426c/- | (cc=0.5343) | info on Rv2426c/- |
| Rv2378c/mbtG | (cc=0.5287) | info on Rv2378c/mbtG |
| Rv0964c/- | (cc=0.5137) | info on Rv0964c/- |
| Rv2474c/- | (cc=0.5114) | info on Rv2474c/- |
| Rv2599/- | (cc=0.5021) | info on Rv2599/- |
| Rv3056/dinP | (cc=0.4985) | info on Rv3056/dinP |
| Rv3536c/hsaE | (cc=0.4967) | info on Rv3536c/hsaE |
| Rv2380c/mbtE | (cc=0.4928) | info on Rv2380c/mbtE |
| Rv3058c/- | (cc=0.4896) | info on Rv3058c/- |
Correlation of Rv0024/- with Rv3056/dinP
Normalized LFCs for Rv0024/-:
(description and provenance of datasets)
| Rv0024/- | Rv3056/dinP | |
| Fe_supp_jason_reseq | -0.485 | -0.327 |
| low_pH_jason_reseq | 0.049 | -1.154 |
| NO_jason_reseq | -0.68 | -0.218 |
| B6_jason_reseq | 0.136 | 0.0 |
| MHCII_jason_reseq | 0.111 | 0.432 |
| Isoniazid02 | -0.175 | 0.92 |
| Rifampicin4 | 0.135 | 0.084 |
| Ethambutol3 | 0.461 | 1.536 |
| Meropenem3 | -0.555 | 0.037 |
| Vancomycin16 | -0.43 | -0.236 |
| Rv2680_day32 | -0.965 | -0.788 |
| H37Rv_KO_MarP | 0.785 | 0.779 |
| hypoxia_3wks | -0.044 | -0.275 |
| hypoxia_6wks | -0.487 | -0.925 |
| glycerol | 0.369 | -0.253 |
| cholesterol | 0.249 | -0.01 |
| AJ | -0.261 | 0.669 |
| Bibs02 | 0.384 | -0.132 |
| Bibs02c | -0.362 | -0.196 |
| BL6 | -1.094 | -0.592 |
| BL6a | 0.013 | -0.738 |
| BXD01 | -0.773 | -0.458 |
| BXD010 | -0.116 | -0.971 |
| BXD011 | -0.403 | -0.851 |
| BXD03 | 0.263 | -0.595 |
| BXD04 | 0.176 | -0.159 |
| BXD05 | -0.036 | -0.994 |
| BXD06 | -0.307 | -0.886 |
| BXD07 | -0.115 | -1.151 |
| BXD08 | -0.19 | -0.824 |
| BXD09 | -0.288 | -0.978 |
| CAST | -0.399 | -0.057 |
| CCcont | -0.688 | -0.83 |
| DS01 | 0.152 | 0.017 |
| DS02 | 0.221 | -0.326 |
| DS04 | -0.43 | 0.204 |
| DS0c | -0.891 | -0.259 |
| GP01 | -0.476 | -0.406 |
| GP02 | -0.565 | 0.283 |
| GP0c | 0.163 | -0.184 |
| NOD | 0.423 | 0.042 |
| NZO | 0.214 | 0.459 |
| PWK | 0.151 | 0.286 |
| H37Rv_KO_CtpC | -0.347 | 0.209 |
| H37Rv_KO_CtpD | 0.93 | -0.339 |
| H37Rv_KO_Rv1272 | -0.459 | -0.615 |
| H37Rv_KO_SugABC | 0.534 | 0.404 |
| H37Rv_KO_MbtN | -0.713 | 0.209 |
| Trans05 | -0.921 | -0.24 |
| macrophage_unactivated | -0.436 | -0.745 |
| IL1 | -0.475 | -1.186 |
| Rapamycin | -1.019 | -1.096 |
| Tcell | -0.277 | -0.57 |
| GMCSF | -0.224 | -1.65 |
| IFNab | -0.925 | -1.37 |
| IFNg | -0.15 | -0.799 |
| IFNg_GMCSF1 | -0.456 | 0.104 |
| Rv1432_day32 | -0.125 | -0.159 |
| Rv1565c_day32 | -0.175 | -0.03 |
| secA2_input | 0.726 | 0.371 |
| delta_Rv3594 | -0.665 | -0.242 |
| delta_Rv3717 | -0.715 | -0.21 |
| delta_Rv3811 | -0.922 | -0.062 |
| delta_Rv0954 | 0.076 | 0.784 |
| PonA1 | 0.361 | 0.435 |
| EccD1_KO | 1.72 | 1.072 |
| EspI_KO | 0.607 | 0.702 |
| PE35_KO | 1.21 | 0.26 |
| PPE68_KO | 1.593 | 0.419 |
| glycerol2 | 0.513 | 1.578 |
| lignocerate | 0.776 | 0.992 |
| oleate | 0.335 | 0.403 |
| phosphatidylcholine | 0.443 | 1.448 |
| acetate | 1.716 | 0.128 |
| glucAc | 1.099 | 0.08 |
| Rv0950ko | 1.028 | -0.289 |
| Rv1096ko | 0.576 | 0.287 |
| Rv3684ko | 0.305 | 0.537 |
| delta_otsA_trehalose | -0.356 | -0.387 |