Top 10 genes with highest correlation to Rv0024/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5636) | info on Rv2980/- |
| Rv2426c/- | (cc=0.5343) | info on Rv2426c/- |
| Rv2378c/mbtG | (cc=0.5287) | info on Rv2378c/mbtG |
| Rv0964c/- | (cc=0.5137) | info on Rv0964c/- |
| Rv2474c/- | (cc=0.5114) | info on Rv2474c/- |
| Rv2599/- | (cc=0.5021) | info on Rv2599/- |
| Rv3056/dinP | (cc=0.4985) | info on Rv3056/dinP |
| Rv3536c/hsaE | (cc=0.4967) | info on Rv3536c/hsaE |
| Rv2380c/mbtE | (cc=0.4928) | info on Rv2380c/mbtE |
| Rv3058c/- | (cc=0.4896) | info on Rv3058c/- |
Correlation of Rv0024/- with Rv3058c/-
Normalized LFCs for Rv0024/-:
(description and provenance of datasets)
| Rv0024/- | Rv3058c/- | |
| Fe_supp_jason_reseq | -0.485 | -0.339 |
| low_pH_jason_reseq | 0.049 | -1.275 |
| NO_jason_reseq | -0.68 | -1.42 |
| B6_jason_reseq | 0.136 | -1.367 |
| MHCII_jason_reseq | 0.111 | -0.287 |
| Isoniazid02 | -0.175 | -2.551 |
| Rifampicin4 | 0.135 | -1.375 |
| Ethambutol3 | 0.461 | 1.008 |
| Meropenem3 | -0.555 | -0.89 |
| Vancomycin16 | -0.43 | -1.971 |
| Rv2680_day32 | -0.965 | -1.059 |
| H37Rv_KO_MarP | 0.785 | 2.314 |
| hypoxia_3wks | -0.044 | -0.367 |
| hypoxia_6wks | -0.487 | -0.134 |
| glycerol | 0.369 | -1.219 |
| cholesterol | 0.249 | -2.073 |
| AJ | -0.261 | 0.255 |
| Bibs02 | 0.384 | -1.526 |
| Bibs02c | -0.362 | -1.629 |
| BL6 | -1.094 | -2.223 |
| BL6a | 0.013 | -1.871 |
| BXD01 | -0.773 | -2.739 |
| BXD010 | -0.116 | -2.712 |
| BXD011 | -0.403 | -2.487 |
| BXD03 | 0.263 | -1.704 |
| BXD04 | 0.176 | -2.414 |
| BXD05 | -0.036 | -2.911 |
| BXD06 | -0.307 | -3.679 |
| BXD07 | -0.115 | -3.23 |
| BXD08 | -0.19 | -1.966 |
| BXD09 | -0.288 | -4.27 |
| CAST | -0.399 | 0.46 |
| CCcont | -0.688 | -0.791 |
| DS01 | 0.152 | -1.879 |
| DS02 | 0.221 | -2.874 |
| DS04 | -0.43 | -3.405 |
| DS0c | -0.891 | -2.72 |
| GP01 | -0.476 | -2.006 |
| GP02 | -0.565 | -2.73 |
| GP0c | 0.163 | -3.106 |
| NOD | 0.423 | 0.672 |
| NZO | 0.214 | -0.623 |
| PWK | 0.151 | 0.51 |
| H37Rv_KO_CtpC | -0.347 | -0.211 |
| H37Rv_KO_CtpD | 0.93 | -1.019 |
| H37Rv_KO_Rv1272 | -0.459 | -2.109 |
| H37Rv_KO_SugABC | 0.534 | -3.448 |
| H37Rv_KO_MbtN | -0.713 | -2.442 |
| Trans05 | -0.921 | -2.637 |
| macrophage_unactivated | -0.436 | -1.231 |
| IL1 | -0.475 | -1.744 |
| Rapamycin | -1.019 | -1.66 |
| Tcell | -0.277 | -0.873 |
| GMCSF | -0.224 | -1.164 |
| IFNab | -0.925 | -3.516 |
| IFNg | -0.15 | -1.625 |
| IFNg_GMCSF1 | -0.456 | -1.91 |
| Rv1432_day32 | -0.125 | -2.632 |
| Rv1565c_day32 | -0.175 | 0.069 |
| secA2_input | 0.726 | 0.609 |
| delta_Rv3594 | -0.665 | -1.138 |
| delta_Rv3717 | -0.715 | -2.022 |
| delta_Rv3811 | -0.922 | -1.553 |
| delta_Rv0954 | 0.076 | 0.774 |
| PonA1 | 0.361 | 2.176 |
| EccD1_KO | 1.72 | -0.398 |
| EspI_KO | 0.607 | -0.22 |
| PE35_KO | 1.21 | 0.831 |
| PPE68_KO | 1.593 | 0.666 |
| glycerol2 | 0.513 | 4.618 |
| lignocerate | 0.776 | 2.532 |
| oleate | 0.335 | 0.679 |
| phosphatidylcholine | 0.443 | 5.238 |
| acetate | 1.716 | 0.53 |
| glucAc | 1.099 | -0.159 |
| Rv0950ko | 1.028 | 0.362 |
| Rv1096ko | 0.576 | -0.09 |
| Rv3684ko | 0.305 | 0.282 |
| delta_otsA_trehalose | -0.356 | -0.217 |