Top 10 genes with highest correlation to Rv0024/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2980/- | (cc=0.5636) | info on Rv2980/- |
| Rv2426c/- | (cc=0.5343) | info on Rv2426c/- |
| Rv2378c/mbtG | (cc=0.5287) | info on Rv2378c/mbtG |
| Rv0964c/- | (cc=0.5137) | info on Rv0964c/- |
| Rv2474c/- | (cc=0.5114) | info on Rv2474c/- |
| Rv2599/- | (cc=0.5021) | info on Rv2599/- |
| Rv3056/dinP | (cc=0.4985) | info on Rv3056/dinP |
| Rv3536c/hsaE | (cc=0.4967) | info on Rv3536c/hsaE |
| Rv2380c/mbtE | (cc=0.4928) | info on Rv2380c/mbtE |
| Rv3058c/- | (cc=0.4896) | info on Rv3058c/- |
Correlation of Rv0024/- with Rv0964c/-
Normalized LFCs for Rv0024/-:
(description and provenance of datasets)
| Rv0024/- | Rv0964c/- | |
| Fe_supp_jason_reseq | -0.485 | -2.796 |
| low_pH_jason_reseq | 0.049 | 0.524 |
| NO_jason_reseq | -0.68 | -0.953 |
| B6_jason_reseq | 0.136 | 0.912 |
| MHCII_jason_reseq | 0.111 | 0.963 |
| Isoniazid02 | -0.175 | 0.242 |
| Rifampicin4 | 0.135 | 0.663 |
| Ethambutol3 | 0.461 | -0.303 |
| Meropenem3 | -0.555 | -0.277 |
| Vancomycin16 | -0.43 | 0.366 |
| Rv2680_day32 | -0.965 | -0.423 |
| H37Rv_KO_MarP | 0.785 | -0.085 |
| hypoxia_3wks | -0.044 | 0.0 |
| hypoxia_6wks | -0.487 | 0.699 |
| glycerol | 0.369 | -0.149 |
| cholesterol | 0.249 | -0.378 |
| AJ | -0.261 | -0.619 |
| Bibs02 | 0.384 | 0.461 |
| Bibs02c | -0.362 | 0.249 |
| BL6 | -1.094 | -0.242 |
| BL6a | 0.013 | -0.815 |
| BXD01 | -0.773 | -1.849 |
| BXD010 | -0.116 | -2.665 |
| BXD011 | -0.403 | -1.69 |
| BXD03 | 0.263 | 0.14 |
| BXD04 | 0.176 | -1.484 |
| BXD05 | -0.036 | -2.345 |
| BXD06 | -0.307 | -1.655 |
| BXD07 | -0.115 | -1.183 |
| BXD08 | -0.19 | -1.414 |
| BXD09 | -0.288 | -1.783 |
| CAST | -0.399 | 1.098 |
| CCcont | -0.688 | -0.802 |
| DS01 | 0.152 | 0.739 |
| DS02 | 0.221 | 0.707 |
| DS04 | -0.43 | 0.802 |
| DS0c | -0.891 | 0.33 |
| GP01 | -0.476 | -0.176 |
| GP02 | -0.565 | -0.148 |
| GP0c | 0.163 | 0.267 |
| NOD | 0.423 | 0.399 |
| NZO | 0.214 | -0.63 |
| PWK | 0.151 | 0.081 |
| H37Rv_KO_CtpC | -0.347 | -2.904 |
| H37Rv_KO_CtpD | 0.93 | 0.829 |
| H37Rv_KO_Rv1272 | -0.459 | -1.711 |
| H37Rv_KO_SugABC | 0.534 | -0.634 |
| H37Rv_KO_MbtN | -0.713 | -1.751 |
| Trans05 | -0.921 | -1.834 |
| macrophage_unactivated | -0.436 | -0.275 |
| IL1 | -0.475 | 0.092 |
| Rapamycin | -1.019 | 0.095 |
| Tcell | -0.277 | 0.365 |
| GMCSF | -0.224 | 0.689 |
| IFNab | -0.925 | -1.046 |
| IFNg | -0.15 | -0.452 |
| IFNg_GMCSF1 | -0.456 | -0.035 |
| Rv1432_day32 | -0.125 | 1.55 |
| Rv1565c_day32 | -0.175 | -2.41 |
| secA2_input | 0.726 | 0.388 |
| delta_Rv3594 | -0.665 | -0.203 |
| delta_Rv3717 | -0.715 | -0.321 |
| delta_Rv3811 | -0.922 | -1.02 |
| delta_Rv0954 | 0.076 | -1.344 |
| PonA1 | 0.361 | -0.756 |
| EccD1_KO | 1.72 | 0.52 |
| EspI_KO | 0.607 | -0.508 |
| PE35_KO | 1.21 | 1.088 |
| PPE68_KO | 1.593 | 1.657 |
| glycerol2 | 0.513 | 2.826 |
| lignocerate | 0.776 | 3.942 |
| oleate | 0.335 | 1.969 |
| phosphatidylcholine | 0.443 | 3.419 |
| acetate | 1.716 | 4.683 |
| glucAc | 1.099 | 3.524 |
| Rv0950ko | 1.028 | -0.178 |
| Rv1096ko | 0.576 | -0.458 |
| Rv3684ko | 0.305 | -0.786 |
| delta_otsA_trehalose | -0.356 | -0.415 |