Top 10 genes with highest correlation to Rv3923c/rnpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3193c/- | (cc=0.7337) | info on Rv3193c/- |
| Rv2169c/- | (cc=0.7144) | info on Rv2169c/- |
| Rv2535c/pepQ | (cc=0.6465) | info on Rv2535c/pepQ |
| Rv3455c/truA | (cc=0.6443) | info on Rv3455c/truA |
| Rv2470/glbO | (cc=0.5759) | info on Rv2470/glbO |
| Rv0003/recF | (cc=0.5683) | info on Rv0003/recF |
| Rv1010/ksgA | (cc=0.5675) | info on Rv1010/ksgA |
| Rv2737c/recA | (cc=0.5399) | info on Rv2737c/recA |
| Rv0067c/- | (cc=0.5295) | info on Rv0067c/- |
| Rv1432/- | (cc=0.5187) | info on Rv1432/- |
Correlation of Rv3923c/rnpA with Rv2535c/pepQ
Normalized LFCs for Rv3923c/rnpA:
(description and provenance of datasets)
| Rv3923c/rnpA | Rv2535c/pepQ | |
| Fe_supp_jason_reseq | 1.579 | 1.68 |
| low_pH_jason_reseq | 0.634 | -0.231 |
| NO_jason_reseq | 0.0 | -0.362 |
| B6_jason_reseq | 0.0 | -0.153 |
| MHCII_jason_reseq | 0.0 | -0.135 |
| Isoniazid02 | -0.146 | -2.369 |
| Rifampicin4 | -1.21 | -1.7 |
| Ethambutol3 | -0.251 | -0.278 |
| Meropenem3 | 0.315 | -1.801 |
| Vancomycin16 | -1.186 | -2.032 |
| Rv2680_day32 | 0.0 | -0.359 |
| H37Rv_KO_MarP | -0.116 | 0.7 |
| hypoxia_3wks | 0.459 | -0.55 |
| hypoxia_6wks | -0.549 | -0.288 |
| glycerol | -0.654 | 0.353 |
| cholesterol | -0.105 | 2.735 |
| AJ | 0.0 | -0.232 |
| Bibs02 | -0.592 | -0.183 |
| Bibs02c | -0.677 | -0.209 |
| BL6 | -0.53 | -0.125 |
| BL6a | -0.462 | -0.198 |
| BXD01 | -0.304 | -0.13 |
| BXD010 | -0.543 | -0.128 |
| BXD011 | -0.54 | 0.0 |
| BXD03 | -0.573 | -0.135 |
| BXD04 | -0.4 | -0.124 |
| BXD05 | -0.436 | 0.0 |
| BXD06 | -0.566 | -0.133 |
| BXD07 | -0.448 | -0.138 |
| BXD08 | -0.31 | -0.133 |
| BXD09 | -0.596 | -0.14 |
| CAST | -0.537 | -0.23 |
| CCcont | 0.733 | 2.128 |
| DS01 | 1.16 | -0.236 |
| DS02 | -0.922 | -0.217 |
| DS04 | -0.453 | 0.177 |
| DS0c | -0.157 | -0.217 |
| GP01 | -0.418 | -0.099 |
| GP02 | -0.353 | -0.083 |
| GP0c | -0.551 | 0.227 |
| NOD | 0.675 | -0.225 |
| NZO | -0.646 | -0.199 |
| PWK | -0.635 | -0.196 |
| H37Rv_KO_CtpC | -0.688 | 0.284 |
| H37Rv_KO_CtpD | -0.537 | 0.791 |
| H37Rv_KO_Rv1272 | -0.457 | 0.246 |
| H37Rv_KO_SugABC | -0.42 | 0.808 |
| H37Rv_KO_MbtN | 0.31 | 0.841 |
| Trans05 | -0.095 | -0.131 |
| macrophage_unactivated | 0.0 | 1.48 |
| IL1 | -0.409 | -0.341 |
| Rapamycin | -0.424 | 0.0 |
| Tcell | -0.45 | 0.349 |
| GMCSF | -0.364 | 0.283 |
| IFNab | 0.0 | 0.623 |
| IFNg | -0.369 | -0.307 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | 0.0 | -1.207 |
| Rv1565c_day32 | 0.0 | -0.218 |
| secA2_input | -1.327 | 2.052 |
| delta_Rv3594 | 0.402 | 2.022 |
| delta_Rv3717 | -0.736 | 0.736 |
| delta_Rv3811 | -0.306 | 1.41 |
| delta_Rv0954 | -1.172 | 1.081 |
| PonA1 | -1.67 | -0.402 |
| EccD1_KO | 1.559 | 1.891 |
| EspI_KO | 0.433 | 2.119 |
| PE35_KO | 0.648 | 1.846 |
| PPE68_KO | 2.038 | 2.377 |
| glycerol2 | -2.322 | -4.566 |
| lignocerate | -2.479 | -2.986 |
| oleate | -2.691 | -6.0 |
| phosphatidylcholine | -2.851 | -2.654 |
| acetate | 0.17 | 0.128 |
| glucAc | 0.41 | 0.453 |
| Rv0950ko | -1.764 | -1.095 |
| Rv1096ko | -1.016 | 0.0 |
| Rv3684ko | 0.0 | 0.105 |
| delta_otsA_trehalose | -0.329 | 0.906 |