Top 10 genes with highest correlation to Rv3786c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6376) | info on Rv0470A/- |
| Rv3506/fadD17 | (cc=0.5985) | info on Rv3506/fadD17 |
| Rv3618/- | (cc=0.573) | info on Rv3618/- |
| Rv2402/- | (cc=0.5614) | info on Rv2402/- |
| Rv0329c/- | (cc=0.531) | info on Rv0329c/- |
| Rv2564/glnQ | (cc=0.5215) | info on Rv2564/glnQ |
| Rv0964c/- | (cc=0.5146) | info on Rv0964c/- |
| Rv2007c/fdxA | (cc=0.5122) | info on Rv2007c/fdxA |
| Rv0271c/fadE6 | (cc=0.5055) | info on Rv0271c/fadE6 |
| Rv0266c/oplA | (cc=0.5038) | info on Rv0266c/oplA |
Correlation of Rv3786c/- with Rv3618/-
Normalized LFCs for Rv3786c/-:
(description and provenance of datasets)
| Rv3786c/- | Rv3618/- | |
| Fe_supp_jason_reseq | -0.2 | -0.065 |
| low_pH_jason_reseq | -0.03 | -0.505 |
| NO_jason_reseq | -0.386 | -0.053 |
| B6_jason_reseq | 0.123 | -0.153 |
| MHCII_jason_reseq | 0.456 | 0.652 |
| Isoniazid02 | -0.294 | 0.0 |
| Rifampicin4 | -0.255 | -0.485 |
| Ethambutol3 | 0.107 | -0.033 |
| Meropenem3 | 0.046 | -0.065 |
| Vancomycin16 | -0.342 | -0.096 |
| Rv2680_day32 | -0.634 | -0.956 |
| H37Rv_KO_MarP | 0.477 | 0.04 |
| hypoxia_3wks | -0.191 | -0.355 |
| hypoxia_6wks | -0.441 | -0.405 |
| glycerol | 0.171 | 0.209 |
| cholesterol | 0.142 | 0.377 |
| AJ | 0.008 | 0.435 |
| Bibs02 | -0.419 | -0.538 |
| Bibs02c | 0.468 | -0.271 |
| BL6 | -0.53 | 0.362 |
| BL6a | -0.089 | 0.026 |
| BXD01 | -0.794 | -0.217 |
| BXD010 | -0.615 | -0.334 |
| BXD011 | 0.351 | 0.064 |
| BXD03 | -0.544 | 0.068 |
| BXD04 | -0.909 | -0.244 |
| BXD05 | -0.295 | 0.459 |
| BXD06 | -0.566 | -0.163 |
| BXD07 | -0.49 | -0.027 |
| BXD08 | -0.535 | -0.262 |
| BXD09 | -0.604 | 0.07 |
| CAST | -0.043 | 0.185 |
| CCcont | -0.236 | 0.129 |
| DS01 | 0.263 | -0.394 |
| DS02 | 0.139 | 0.187 |
| DS04 | 0.718 | -0.142 |
| DS0c | 0.597 | -0.234 |
| GP01 | -0.277 | -0.233 |
| GP02 | -0.395 | -0.47 |
| GP0c | -0.339 | -0.777 |
| NOD | 0.607 | 1.699 |
| NZO | 0.142 | 0.416 |
| PWK | 0.179 | 0.388 |
| H37Rv_KO_CtpC | -0.379 | -0.234 |
| H37Rv_KO_CtpD | 0.137 | -0.26 |
| H37Rv_KO_Rv1272 | -0.536 | -0.579 |
| H37Rv_KO_SugABC | 0.194 | 1.365 |
| H37Rv_KO_MbtN | -0.05 | 0.154 |
| Trans05 | -0.125 | -0.104 |
| macrophage_unactivated | -0.54 | -0.287 |
| IL1 | 0.062 | -0.424 |
| Rapamycin | -0.064 | 0.399 |
| Tcell | 0.023 | -0.033 |
| GMCSF | 0.354 | 0.594 |
| IFNab | 0.423 | -0.151 |
| IFNg | -0.607 | 0.128 |
| IFNg_GMCSF1 | 0.173 | 0.886 |
| Rv1432_day32 | -0.274 | 0.12 |
| Rv1565c_day32 | -1.112 | -1.06 |
| secA2_input | 0.235 | 0.618 |
| delta_Rv3594 | -0.682 | 0.471 |
| delta_Rv3717 | -0.49 | 0.513 |
| delta_Rv3811 | -0.083 | 0.7 |
| delta_Rv0954 | -0.105 | 0.072 |
| PonA1 | 0.26 | 0.42 |
| EccD1_KO | 0.0 | -0.237 |
| EspI_KO | -0.271 | -0.827 |
| PE35_KO | -0.478 | -0.053 |
| PPE68_KO | -0.342 | 0.0 |
| glycerol2 | 0.434 | 0.891 |
| lignocerate | 1.033 | 1.001 |
| oleate | -0.118 | -0.231 |
| phosphatidylcholine | 0.549 | 0.913 |
| acetate | 0.637 | 1.084 |
| glucAc | 0.633 | 1.245 |
| Rv0950ko | 1.007 | 0.691 |
| Rv1096ko | 0.422 | 0.283 |
| Rv3684ko | 0.567 | 0.658 |
| delta_otsA_trehalose | -0.024 | 0.168 |