Top 10 genes with highest correlation to Rv3786c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6376) | info on Rv0470A/- |
| Rv3506/fadD17 | (cc=0.5985) | info on Rv3506/fadD17 |
| Rv3618/- | (cc=0.573) | info on Rv3618/- |
| Rv2402/- | (cc=0.5614) | info on Rv2402/- |
| Rv0329c/- | (cc=0.531) | info on Rv0329c/- |
| Rv2564/glnQ | (cc=0.5215) | info on Rv2564/glnQ |
| Rv0964c/- | (cc=0.5146) | info on Rv0964c/- |
| Rv2007c/fdxA | (cc=0.5122) | info on Rv2007c/fdxA |
| Rv0271c/fadE6 | (cc=0.5055) | info on Rv0271c/fadE6 |
| Rv0266c/oplA | (cc=0.5038) | info on Rv0266c/oplA |
Correlation of Rv3786c/- with Rv0329c/-
Normalized LFCs for Rv3786c/-:
(description and provenance of datasets)
| Rv3786c/- | Rv0329c/- | |
| Fe_supp_jason_reseq | -0.2 | 0.379 |
| low_pH_jason_reseq | -0.03 | -0.134 |
| NO_jason_reseq | -0.386 | -0.26 |
| B6_jason_reseq | 0.123 | -0.659 |
| MHCII_jason_reseq | 0.456 | -0.895 |
| Isoniazid02 | -0.294 | 0.338 |
| Rifampicin4 | -0.255 | 0.07 |
| Ethambutol3 | 0.107 | 0.618 |
| Meropenem3 | 0.046 | 1.267 |
| Vancomycin16 | -0.342 | 0.674 |
| Rv2680_day32 | -0.634 | 0.263 |
| H37Rv_KO_MarP | 0.477 | 0.072 |
| hypoxia_3wks | -0.191 | -0.897 |
| hypoxia_6wks | -0.441 | -0.618 |
| glycerol | 0.171 | 1.233 |
| cholesterol | 0.142 | 0.093 |
| AJ | 0.008 | 0.684 |
| Bibs02 | -0.419 | 0.368 |
| Bibs02c | 0.468 | 0.192 |
| BL6 | -0.53 | 0.132 |
| BL6a | -0.089 | -0.217 |
| BXD01 | -0.794 | 0.038 |
| BXD010 | -0.615 | -1.189 |
| BXD011 | 0.351 | -0.248 |
| BXD03 | -0.544 | -1.678 |
| BXD04 | -0.909 | -0.942 |
| BXD05 | -0.295 | -0.851 |
| BXD06 | -0.566 | -0.508 |
| BXD07 | -0.49 | -0.542 |
| BXD08 | -0.535 | -0.201 |
| BXD09 | -0.604 | -0.351 |
| CAST | -0.043 | 1.093 |
| CCcont | -0.236 | 0.449 |
| DS01 | 0.263 | 0.185 |
| DS02 | 0.139 | -0.386 |
| DS04 | 0.718 | 0.846 |
| DS0c | 0.597 | 0.837 |
| GP01 | -0.277 | 0.45 |
| GP02 | -0.395 | 0.371 |
| GP0c | -0.339 | 0.324 |
| NOD | 0.607 | 0.325 |
| NZO | 0.142 | 1.37 |
| PWK | 0.179 | 0.419 |
| H37Rv_KO_CtpC | -0.379 | -1.598 |
| H37Rv_KO_CtpD | 0.137 | -0.523 |
| H37Rv_KO_Rv1272 | -0.536 | -1.651 |
| H37Rv_KO_SugABC | 0.194 | 0.629 |
| H37Rv_KO_MbtN | -0.05 | -0.201 |
| Trans05 | -0.125 | -0.808 |
| macrophage_unactivated | -0.54 | 0.041 |
| IL1 | 0.062 | -0.243 |
| Rapamycin | -0.064 | -0.657 |
| Tcell | 0.023 | -0.222 |
| GMCSF | 0.354 | 0.523 |
| IFNab | 0.423 | -0.692 |
| IFNg | -0.607 | -1.39 |
| IFNg_GMCSF1 | 0.173 | 1.166 |
| Rv1432_day32 | -0.274 | -0.408 |
| Rv1565c_day32 | -1.112 | 0.676 |
| secA2_input | 0.235 | -0.252 |
| delta_Rv3594 | -0.682 | -1.234 |
| delta_Rv3717 | -0.49 | -1.128 |
| delta_Rv3811 | -0.083 | -1.077 |
| delta_Rv0954 | -0.105 | -0.775 |
| PonA1 | 0.26 | 0.471 |
| EccD1_KO | 0.0 | -0.24 |
| EspI_KO | -0.271 | -0.299 |
| PE35_KO | -0.478 | 0.26 |
| PPE68_KO | -0.342 | -0.445 |
| glycerol2 | 0.434 | 1.197 |
| lignocerate | 1.033 | 1.97 |
| oleate | -0.118 | -0.625 |
| phosphatidylcholine | 0.549 | 1.234 |
| acetate | 0.637 | 1.684 |
| glucAc | 0.633 | 1.611 |
| Rv0950ko | 1.007 | 0.832 |
| Rv1096ko | 0.422 | 0.525 |
| Rv3684ko | 0.567 | 0.648 |
| delta_otsA_trehalose | -0.024 | 0.769 |