Top 10 genes with highest correlation to Rv3786c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6376) | info on Rv0470A/- |
| Rv3506/fadD17 | (cc=0.5985) | info on Rv3506/fadD17 |
| Rv3618/- | (cc=0.573) | info on Rv3618/- |
| Rv2402/- | (cc=0.5614) | info on Rv2402/- |
| Rv0329c/- | (cc=0.531) | info on Rv0329c/- |
| Rv2564/glnQ | (cc=0.5215) | info on Rv2564/glnQ |
| Rv0964c/- | (cc=0.5146) | info on Rv0964c/- |
| Rv2007c/fdxA | (cc=0.5122) | info on Rv2007c/fdxA |
| Rv0271c/fadE6 | (cc=0.5055) | info on Rv0271c/fadE6 |
| Rv0266c/oplA | (cc=0.5038) | info on Rv0266c/oplA |
Correlation of Rv3786c/- with Rv2564/glnQ
Normalized LFCs for Rv3786c/-:
(description and provenance of datasets)
| Rv3786c/- | Rv2564/glnQ | |
| Fe_supp_jason_reseq | -0.2 | 2.013 |
| low_pH_jason_reseq | -0.03 | -0.333 |
| NO_jason_reseq | -0.386 | -1.853 |
| B6_jason_reseq | 0.123 | -1.519 |
| MHCII_jason_reseq | 0.456 | -0.932 |
| Isoniazid02 | -0.294 | 0.036 |
| Rifampicin4 | -0.255 | -2.134 |
| Ethambutol3 | 0.107 | 1.918 |
| Meropenem3 | 0.046 | 0.649 |
| Vancomycin16 | -0.342 | -0.578 |
| Rv2680_day32 | -0.634 | -2.923 |
| H37Rv_KO_MarP | 0.477 | 0.621 |
| hypoxia_3wks | -0.191 | -3.038 |
| hypoxia_6wks | -0.441 | -2.011 |
| glycerol | 0.171 | 0.676 |
| cholesterol | 0.142 | 0.44 |
| AJ | 0.008 | -3.514 |
| Bibs02 | -0.419 | -2.262 |
| Bibs02c | 0.468 | 0.652 |
| BL6 | -0.53 | -2.64 |
| BL6a | -0.089 | -1.086 |
| BXD01 | -0.794 | -3.107 |
| BXD010 | -0.615 | -1.829 |
| BXD011 | 0.351 | -2.911 |
| BXD03 | -0.544 | -1.721 |
| BXD04 | -0.909 | -2.264 |
| BXD05 | -0.295 | -3.076 |
| BXD06 | -0.566 | -2.714 |
| BXD07 | -0.49 | -2.716 |
| BXD08 | -0.535 | -2.704 |
| BXD09 | -0.604 | -3.352 |
| CAST | -0.043 | -0.429 |
| CCcont | -0.236 | 0.355 |
| DS01 | 0.263 | 2.322 |
| DS02 | 0.139 | 0.607 |
| DS04 | 0.718 | 2.805 |
| DS0c | 0.597 | 1.673 |
| GP01 | -0.277 | -2.355 |
| GP02 | -0.395 | -1.985 |
| GP0c | -0.339 | -3.102 |
| NOD | 0.607 | 0.552 |
| NZO | 0.142 | -2.766 |
| PWK | 0.179 | 1.212 |
| H37Rv_KO_CtpC | -0.379 | -0.95 |
| H37Rv_KO_CtpD | 0.137 | -0.764 |
| H37Rv_KO_Rv1272 | -0.536 | -1.846 |
| H37Rv_KO_SugABC | 0.194 | -1.5 |
| H37Rv_KO_MbtN | -0.05 | -1.952 |
| Trans05 | -0.125 | -2.986 |
| macrophage_unactivated | -0.54 | 0.947 |
| IL1 | 0.062 | -1.818 |
| Rapamycin | -0.064 | -0.543 |
| Tcell | 0.023 | 0.0 |
| GMCSF | 0.354 | 0.671 |
| IFNab | 0.423 | 0.163 |
| IFNg | -0.607 | -1.013 |
| IFNg_GMCSF1 | 0.173 | -0.179 |
| Rv1432_day32 | -0.274 | -3.206 |
| Rv1565c_day32 | -1.112 | -0.509 |
| secA2_input | 0.235 | -1.198 |
| delta_Rv3594 | -0.682 | -2.272 |
| delta_Rv3717 | -0.49 | -1.869 |
| delta_Rv3811 | -0.083 | -1.817 |
| delta_Rv0954 | -0.105 | 1.292 |
| PonA1 | 0.26 | 2.505 |
| EccD1_KO | 0.0 | 0.0 |
| EspI_KO | -0.271 | -0.274 |
| PE35_KO | -0.478 | 1.126 |
| PPE68_KO | -0.342 | 0.816 |
| glycerol2 | 0.434 | -1.572 |
| lignocerate | 1.033 | -0.049 |
| oleate | -0.118 | -2.139 |
| phosphatidylcholine | 0.549 | -0.874 |
| acetate | 0.637 | 1.119 |
| glucAc | 0.633 | 0.357 |
| Rv0950ko | 1.007 | 1.414 |
| Rv1096ko | 0.422 | 0.549 |
| Rv3684ko | 0.567 | 0.088 |
| delta_otsA_trehalose | -0.024 | 1.289 |