Top 10 genes with highest correlation to Rv3786c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0470A/- | (cc=0.6376) | info on Rv0470A/- |
| Rv3506/fadD17 | (cc=0.5985) | info on Rv3506/fadD17 |
| Rv3618/- | (cc=0.573) | info on Rv3618/- |
| Rv2402/- | (cc=0.5614) | info on Rv2402/- |
| Rv0329c/- | (cc=0.531) | info on Rv0329c/- |
| Rv2564/glnQ | (cc=0.5215) | info on Rv2564/glnQ |
| Rv0964c/- | (cc=0.5146) | info on Rv0964c/- |
| Rv2007c/fdxA | (cc=0.5122) | info on Rv2007c/fdxA |
| Rv0271c/fadE6 | (cc=0.5055) | info on Rv0271c/fadE6 |
| Rv0266c/oplA | (cc=0.5038) | info on Rv0266c/oplA |
Correlation of Rv3786c/- with Rv0266c/oplA
Normalized LFCs for Rv3786c/-:
(description and provenance of datasets)
| Rv3786c/- | Rv0266c/oplA | |
| Fe_supp_jason_reseq | -0.2 | -0.467 |
| low_pH_jason_reseq | -0.03 | -0.403 |
| NO_jason_reseq | -0.386 | 0.034 |
| B6_jason_reseq | 0.123 | 0.552 |
| MHCII_jason_reseq | 0.456 | 0.24 |
| Isoniazid02 | -0.294 | -0.349 |
| Rifampicin4 | -0.255 | -0.097 |
| Ethambutol3 | 0.107 | -0.212 |
| Meropenem3 | 0.046 | -0.097 |
| Vancomycin16 | -0.342 | -0.233 |
| Rv2680_day32 | -0.634 | 0.035 |
| H37Rv_KO_MarP | 0.477 | 0.468 |
| hypoxia_3wks | -0.191 | 0.0 |
| hypoxia_6wks | -0.441 | -0.274 |
| glycerol | 0.171 | 0.711 |
| cholesterol | 0.142 | -0.016 |
| AJ | 0.008 | 0.099 |
| Bibs02 | -0.419 | 0.172 |
| Bibs02c | 0.468 | -0.512 |
| BL6 | -0.53 | -0.207 |
| BL6a | -0.089 | -0.522 |
| BXD01 | -0.794 | -0.658 |
| BXD010 | -0.615 | -1.178 |
| BXD011 | 0.351 | -0.937 |
| BXD03 | -0.544 | -0.235 |
| BXD04 | -0.909 | -0.46 |
| BXD05 | -0.295 | -0.412 |
| BXD06 | -0.566 | -0.715 |
| BXD07 | -0.49 | -0.846 |
| BXD08 | -0.535 | -0.143 |
| BXD09 | -0.604 | -0.752 |
| CAST | -0.043 | 0.153 |
| CCcont | -0.236 | -0.763 |
| DS01 | 0.263 | -0.282 |
| DS02 | 0.139 | 0.0 |
| DS04 | 0.718 | 0.839 |
| DS0c | 0.597 | 0.189 |
| GP01 | -0.277 | -0.442 |
| GP02 | -0.395 | -0.196 |
| GP0c | -0.339 | -0.664 |
| NOD | 0.607 | -0.667 |
| NZO | 0.142 | 0.173 |
| PWK | 0.179 | -0.036 |
| H37Rv_KO_CtpC | -0.379 | -0.83 |
| H37Rv_KO_CtpD | 0.137 | 0.578 |
| H37Rv_KO_Rv1272 | -0.536 | -0.956 |
| H37Rv_KO_SugABC | 0.194 | -0.135 |
| H37Rv_KO_MbtN | -0.05 | -0.829 |
| Trans05 | -0.125 | 0.105 |
| macrophage_unactivated | -0.54 | -0.597 |
| IL1 | 0.062 | -0.442 |
| Rapamycin | -0.064 | -0.387 |
| Tcell | 0.023 | -0.433 |
| GMCSF | 0.354 | 0.111 |
| IFNab | 0.423 | -0.088 |
| IFNg | -0.607 | 0.019 |
| IFNg_GMCSF1 | 0.173 | 0.154 |
| Rv1432_day32 | -0.274 | 0.28 |
| Rv1565c_day32 | -1.112 | 0.231 |
| secA2_input | 0.235 | 0.645 |
| delta_Rv3594 | -0.682 | -0.288 |
| delta_Rv3717 | -0.49 | -0.138 |
| delta_Rv3811 | -0.083 | -0.452 |
| delta_Rv0954 | -0.105 | 0.278 |
| PonA1 | 0.26 | -0.083 |
| EccD1_KO | 0.0 | -0.536 |
| EspI_KO | -0.271 | -0.445 |
| PE35_KO | -0.478 | -0.513 |
| PPE68_KO | -0.342 | -0.781 |
| glycerol2 | 0.434 | 0.27 |
| lignocerate | 1.033 | 0.476 |
| oleate | -0.118 | 0.418 |
| phosphatidylcholine | 0.549 | 0.392 |
| acetate | 0.637 | 0.076 |
| glucAc | 0.633 | 0.148 |
| Rv0950ko | 1.007 | 0.458 |
| Rv1096ko | 0.422 | 0.6 |
| Rv3684ko | 0.567 | 0.95 |
| delta_otsA_trehalose | -0.024 | -0.123 |