Top 10 genes with highest correlation to Rv3772/hisC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3432c/gadB | (cc=0.5061) | info on Rv3432c/gadB |
| Rv0267/narU | (cc=0.392) | info on Rv0267/narU |
| Rv3224A/- | (cc=0.3878) | info on Rv3224A/- |
| Rv2850c/- | (cc=0.3777) | info on Rv2850c/- |
| Rv3740c/- | (cc=0.3754) | info on Rv3740c/- |
| Rv3133c/devR | (cc=0.3753) | info on Rv3133c/devR |
| Rv1425/- | (cc=0.3703) | info on Rv1425/- |
| Rv1888c/- | (cc=0.3695) | info on Rv1888c/- |
| Rv2521/bcp | (cc=0.3541) | info on Rv2521/bcp |
| Rv2693c/- | (cc=0.3426) | info on Rv2693c/- |
Correlation of Rv3772/hisC2 with Rv2521/bcp
Normalized LFCs for Rv3772/hisC2:
(description and provenance of datasets)
| Rv3772/hisC2 | Rv2521/bcp | |
| Fe_supp_jason_reseq | 0.81 | -0.583 |
| low_pH_jason_reseq | 0.467 | -0.398 |
| NO_jason_reseq | -0.672 | 0.614 |
| B6_jason_reseq | 0.276 | 0.185 |
| MHCII_jason_reseq | -0.236 | -0.108 |
| Isoniazid02 | -0.258 | 0.313 |
| Rifampicin4 | -0.479 | -0.55 |
| Ethambutol3 | 0.054 | 0.337 |
| Meropenem3 | -0.013 | -0.364 |
| Vancomycin16 | 0.573 | 0.523 |
| Rv2680_day32 | 0.427 | 0.845 |
| H37Rv_KO_MarP | 0.037 | 0.488 |
| hypoxia_3wks | -1.14 | -0.674 |
| hypoxia_6wks | -1.906 | 0.388 |
| glycerol | -0.6 | -0.35 |
| cholesterol | 0.244 | 0.021 |
| AJ | -0.592 | 0.469 |
| Bibs02 | -0.321 | -0.842 |
| Bibs02c | -0.341 | -0.871 |
| BL6 | 0.741 | -0.305 |
| BL6a | -0.505 | -0.436 |
| BXD01 | 0.45 | -0.469 |
| BXD010 | 0.328 | 0.496 |
| BXD011 | 0.118 | -0.143 |
| BXD03 | -0.074 | 0.058 |
| BXD04 | -0.125 | -0.125 |
| BXD05 | 0.19 | 0.486 |
| BXD06 | 0.028 | -0.101 |
| BXD07 | 0.155 | -0.597 |
| BXD08 | 0.028 | -0.332 |
| BXD09 | 0.0 | -0.36 |
| CAST | 0.532 | -0.113 |
| CCcont | 1.0 | -0.528 |
| DS01 | 0.149 | -0.253 |
| DS02 | -0.381 | -0.739 |
| DS04 | -0.391 | -1.061 |
| DS0c | -0.523 | -0.903 |
| GP01 | -0.077 | 0.279 |
| GP02 | 1.556 | 1.562 |
| GP0c | 0.195 | 0.391 |
| NOD | -0.176 | -0.067 |
| NZO | 0.735 | 0.246 |
| PWK | -1.4 | -0.467 |
| H37Rv_KO_CtpC | -0.265 | -1.24 |
| H37Rv_KO_CtpD | 0.727 | 1.085 |
| H37Rv_KO_Rv1272 | -0.708 | -0.221 |
| H37Rv_KO_SugABC | -0.514 | 0.301 |
| H37Rv_KO_MbtN | -1.129 | -1.62 |
| Trans05 | 0.491 | -1.273 |
| macrophage_unactivated | 0.407 | 0.606 |
| IL1 | -0.985 | -0.027 |
| Rapamycin | -0.301 | 0.304 |
| Tcell | -1.026 | -0.228 |
| GMCSF | -0.375 | 0.066 |
| IFNab | 0.121 | 0.487 |
| IFNg | -0.037 | 0.2 |
| IFNg_GMCSF1 | -0.588 | -0.481 |
| Rv1432_day32 | 0.224 | 0.0 |
| Rv1565c_day32 | 1.199 | 0.169 |
| secA2_input | 0.758 | -0.451 |
| delta_Rv3594 | 0.262 | 1.219 |
| delta_Rv3717 | -0.982 | 0.63 |
| delta_Rv3811 | -0.152 | -0.018 |
| delta_Rv0954 | 1.092 | -0.505 |
| PonA1 | 0.401 | 1.03 |
| EccD1_KO | -0.197 | -0.276 |
| EspI_KO | -0.876 | -0.471 |
| PE35_KO | -0.493 | -0.245 |
| PPE68_KO | -0.694 | -0.739 |
| glycerol2 | 1.366 | 0.935 |
| lignocerate | 0.452 | 0.605 |
| oleate | 1.243 | -0.612 |
| phosphatidylcholine | 0.423 | 0.368 |
| acetate | -0.106 | -0.116 |
| glucAc | -0.093 | 0.656 |
| Rv0950ko | 0.163 | 0.724 |
| Rv1096ko | 1.167 | 0.585 |
| Rv3684ko | 1.091 | 1.055 |
| delta_otsA_trehalose | -1.383 | -0.711 |