Top 10 genes with highest correlation to Rv3772/hisC2:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3432c/gadB | (cc=0.5061) | info on Rv3432c/gadB |
| Rv0267/narU | (cc=0.392) | info on Rv0267/narU |
| Rv3224A/- | (cc=0.3878) | info on Rv3224A/- |
| Rv2850c/- | (cc=0.3777) | info on Rv2850c/- |
| Rv3740c/- | (cc=0.3754) | info on Rv3740c/- |
| Rv3133c/devR | (cc=0.3753) | info on Rv3133c/devR |
| Rv1425/- | (cc=0.3703) | info on Rv1425/- |
| Rv1888c/- | (cc=0.3695) | info on Rv1888c/- |
| Rv2521/bcp | (cc=0.3541) | info on Rv2521/bcp |
| Rv2693c/- | (cc=0.3426) | info on Rv2693c/- |
Correlation of Rv3772/hisC2 with Rv1888c/-
Normalized LFCs for Rv3772/hisC2:
(description and provenance of datasets)
| Rv3772/hisC2 | Rv1888c/- | |
| Fe_supp_jason_reseq | 0.81 | 0.489 |
| low_pH_jason_reseq | 0.467 | -0.756 |
| NO_jason_reseq | -0.672 | 0.016 |
| B6_jason_reseq | 0.276 | -0.92 |
| MHCII_jason_reseq | -0.236 | -0.144 |
| Isoniazid02 | -0.258 | -0.562 |
| Rifampicin4 | -0.479 | -0.544 |
| Ethambutol3 | 0.054 | -0.328 |
| Meropenem3 | -0.013 | -1.072 |
| Vancomycin16 | 0.573 | -0.424 |
| Rv2680_day32 | 0.427 | 0.996 |
| H37Rv_KO_MarP | 0.037 | 0.73 |
| hypoxia_3wks | -1.14 | -0.072 |
| hypoxia_6wks | -1.906 | -0.449 |
| glycerol | -0.6 | -0.884 |
| cholesterol | 0.244 | -0.623 |
| AJ | -0.592 | -0.583 |
| Bibs02 | -0.321 | -0.31 |
| Bibs02c | -0.341 | -0.332 |
| BL6 | 0.741 | 0.253 |
| BL6a | -0.505 | 0.154 |
| BXD01 | 0.45 | 0.154 |
| BXD010 | 0.328 | 0.045 |
| BXD011 | 0.118 | 0.482 |
| BXD03 | -0.074 | -0.043 |
| BXD04 | -0.125 | 0.039 |
| BXD05 | 0.19 | -0.067 |
| BXD06 | 0.028 | 0.109 |
| BXD07 | 0.155 | 0.186 |
| BXD08 | 0.028 | -0.171 |
| BXD09 | 0.0 | 0.221 |
| CAST | 0.532 | -0.769 |
| CCcont | 1.0 | 0.103 |
| DS01 | 0.149 | -0.351 |
| DS02 | -0.381 | -0.181 |
| DS04 | -0.391 | 0.214 |
| DS0c | -0.523 | 0.556 |
| GP01 | -0.077 | 0.31 |
| GP02 | 1.556 | 1.113 |
| GP0c | 0.195 | 0.133 |
| NOD | -0.176 | -0.133 |
| NZO | 0.735 | -0.691 |
| PWK | -1.4 | -0.271 |
| H37Rv_KO_CtpC | -0.265 | -0.105 |
| H37Rv_KO_CtpD | 0.727 | 0.7 |
| H37Rv_KO_Rv1272 | -0.708 | -0.471 |
| H37Rv_KO_SugABC | -0.514 | 0.097 |
| H37Rv_KO_MbtN | -1.129 | 0.31 |
| Trans05 | 0.491 | -0.545 |
| macrophage_unactivated | 0.407 | 0.701 |
| IL1 | -0.985 | -0.294 |
| Rapamycin | -0.301 | -0.285 |
| Tcell | -1.026 | -0.098 |
| GMCSF | -0.375 | -0.364 |
| IFNab | 0.121 | -0.32 |
| IFNg | -0.037 | -0.494 |
| IFNg_GMCSF1 | -0.588 | -0.625 |
| Rv1432_day32 | 0.224 | 0.532 |
| Rv1565c_day32 | 1.199 | -0.158 |
| secA2_input | 0.758 | -0.269 |
| delta_Rv3594 | 0.262 | -0.324 |
| delta_Rv3717 | -0.982 | -0.084 |
| delta_Rv3811 | -0.152 | -0.349 |
| delta_Rv0954 | 1.092 | 0.393 |
| PonA1 | 0.401 | 0.017 |
| EccD1_KO | -0.197 | -0.391 |
| EspI_KO | -0.876 | -0.596 |
| PE35_KO | -0.493 | -0.362 |
| PPE68_KO | -0.694 | -0.346 |
| glycerol2 | 1.366 | 0.722 |
| lignocerate | 0.452 | 0.522 |
| oleate | 1.243 | 0.751 |
| phosphatidylcholine | 0.423 | 0.829 |
| acetate | -0.106 | 0.588 |
| glucAc | -0.093 | 0.241 |
| Rv0950ko | 0.163 | 0.473 |
| Rv1096ko | 1.167 | -0.232 |
| Rv3684ko | 1.091 | -0.252 |
| delta_otsA_trehalose | -1.383 | -1.003 |