Top 10 genes with highest correlation to Rv3736/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv3056/dinP | (cc=0.5495) | info on Rv3056/dinP |
Rv2490c/PE_PGRS43 | (cc=0.5169) | info on Rv2490c/PE_PGRS43 |
Rv1706c/PPE23 | (cc=0.5101) | info on Rv1706c/PPE23 |
Rv0834c/PE_PGRS14 | (cc=0.495) | info on Rv0834c/PE_PGRS14 |
Rv3289c/- | (cc=0.4906) | info on Rv3289c/- |
Rv2159c/- | (cc=0.4808) | info on Rv2159c/- |
Rv2590/fadD9 | (cc=0.4779) | info on Rv2590/fadD9 |
Rv2062c/cobN | (cc=0.4725) | info on Rv2062c/cobN |
Rv3448/eccD4 | (cc=0.4712) | info on Rv3448/eccD4 |
Rv3026c/- | (cc=0.467) | info on Rv3026c/- |
Correlation of Rv3736/- with Rv2590/fadD9
Normalized LFCs for Rv3736/-:
(description and provenance of datasets)
Rv3736/- | Rv2590/fadD9 | |
Fe_supp_jason_reseq | -1.176 | -0.251 |
low_pH_jason_reseq | -0.206 | -1.092 |
NO_jason_reseq | -0.31 | -0.344 |
B6_jason_reseq | -0.605 | -0.253 |
MHCII_jason_reseq | -0.367 | -0.336 |
Isoniazid02 | -0.068 | 0.586 |
Rifampicin4 | 0.108 | 0.217 |
Ethambutol3 | 0.338 | 0.643 |
Meropenem3 | 0.345 | 0.516 |
Vancomycin16 | -0.109 | 0.013 |
Rv2680_day32 | -0.095 | 0.1 |
H37Rv_KO_MarP | 0.214 | 0.096 |
hypoxia_3wks | -0.506 | 0.263 |
hypoxia_6wks | -0.338 | 0.228 |
glycerol | 0.265 | 0.034 |
cholesterol | -0.11 | 0.205 |
AJ | 1.049 | 0.151 |
Bibs02 | 0.077 | 0.007 |
Bibs02c | 0.171 | -0.168 |
BL6 | -0.06 | -0.06 |
BL6a | -0.253 | -0.089 |
BXD01 | -0.45 | 0.076 |
BXD010 | -0.305 | 0.181 |
BXD011 | -0.475 | 0.198 |
BXD03 | -0.474 | 0.084 |
BXD04 | -0.461 | -0.004 |
BXD05 | -0.053 | -0.069 |
BXD06 | -0.236 | 0.048 |
BXD07 | -0.245 | 0.335 |
BXD08 | -0.141 | -0.078 |
BXD09 | -0.434 | 0.211 |
CAST | -0.167 | -0.063 |
CCcont | -0.54 | -0.547 |
DS01 | -0.084 | 0.048 |
DS02 | -0.435 | 0.058 |
DS04 | 0.555 | 0.101 |
DS0c | 0.217 | 0.182 |
GP01 | -0.221 | 0.262 |
GP02 | 0.269 | 0.212 |
GP0c | 0.156 | -0.081 |
NOD | -0.612 | -0.023 |
NZO | 0.247 | 0.299 |
PWK | -0.117 | 0.065 |
H37Rv_KO_CtpC | -0.265 | -0.045 |
H37Rv_KO_CtpD | -0.029 | 0.414 |
H37Rv_KO_Rv1272 | -0.541 | 0.28 |
H37Rv_KO_SugABC | 0.567 | 0.571 |
H37Rv_KO_MbtN | -0.473 | 0.293 |
Trans05 | -0.382 | 0.185 |
macrophage_unactivated | 0.047 | 0.42 |
IL1 | -0.439 | 0.653 |
Rapamycin | 0.021 | 0.663 |
Tcell | -0.222 | -0.075 |
GMCSF | -0.499 | 0.462 |
IFNab | 0.175 | 0.565 |
IFNg | -0.575 | 0.265 |
IFNg_GMCSF1 | -0.239 | 0.145 |
Rv1432_day32 | 0.518 | 0.389 |
Rv1565c_day32 | -0.073 | -0.34 |
secA2_input | -0.106 | 0.063 |
delta_Rv3594 | -0.194 | 0.35 |
delta_Rv3717 | 0.092 | 0.266 |
delta_Rv3811 | 0.126 | -0.065 |
delta_Rv0954 | 0.043 | 0.096 |
PonA1 | 0.306 | 0.328 |
EccD1_KO | 1.006 | 0.263 |
EspI_KO | 0.436 | 0.759 |
PE35_KO | 0.21 | -0.096 |
PPE68_KO | 0.25 | -0.019 |
glycerol2 | 0.509 | 0.639 |
lignocerate | 0.217 | 0.566 |
oleate | 0.594 | 0.929 |
phosphatidylcholine | 0.979 | 0.831 |
acetate | -0.451 | -0.165 |
glucAc | -0.25 | -0.27 |
Rv0950ko | 0.684 | 0.329 |
Rv1096ko | 0.645 | 0.428 |
Rv3684ko | 0.616 | 0.396 |
delta_otsA_trehalose | -1.076 | -0.627 |