Top 10 genes with highest correlation to Rv3736/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3056/dinP | (cc=0.5495) | info on Rv3056/dinP |
| Rv2490c/PE_PGRS43 | (cc=0.5169) | info on Rv2490c/PE_PGRS43 |
| Rv1706c/PPE23 | (cc=0.5101) | info on Rv1706c/PPE23 |
| Rv0834c/PE_PGRS14 | (cc=0.495) | info on Rv0834c/PE_PGRS14 |
| Rv3289c/- | (cc=0.4906) | info on Rv3289c/- |
| Rv2159c/- | (cc=0.4808) | info on Rv2159c/- |
| Rv2590/fadD9 | (cc=0.4779) | info on Rv2590/fadD9 |
| Rv2062c/cobN | (cc=0.4725) | info on Rv2062c/cobN |
| Rv3448/eccD4 | (cc=0.4712) | info on Rv3448/eccD4 |
| Rv3026c/- | (cc=0.467) | info on Rv3026c/- |
Correlation of Rv3736/- with Rv0834c/PE_PGRS14
Normalized LFCs for Rv3736/-:
(description and provenance of datasets)
| Rv3736/- | Rv0834c/PE_PGRS14 | |
| Fe_supp_jason_reseq | -1.176 | -1.114 |
| low_pH_jason_reseq | -0.206 | -0.642 |
| NO_jason_reseq | -0.31 | -0.667 |
| B6_jason_reseq | -0.605 | -0.762 |
| MHCII_jason_reseq | -0.367 | -0.046 |
| Isoniazid02 | -0.068 | -0.971 |
| Rifampicin4 | 0.108 | 0.723 |
| Ethambutol3 | 0.338 | -0.4 |
| Meropenem3 | 0.345 | 0.016 |
| Vancomycin16 | -0.109 | -0.143 |
| Rv2680_day32 | -0.095 | -0.488 |
| H37Rv_KO_MarP | 0.214 | 0.138 |
| hypoxia_3wks | -0.506 | -0.315 |
| hypoxia_6wks | -0.338 | -0.403 |
| glycerol | 0.265 | 1.138 |
| cholesterol | -0.11 | 0.609 |
| AJ | 1.049 | 0.37 |
| Bibs02 | 0.077 | 0.837 |
| Bibs02c | 0.171 | 1.15 |
| BL6 | -0.06 | 0.083 |
| BL6a | -0.253 | 0.502 |
| BXD01 | -0.45 | 0.044 |
| BXD010 | -0.305 | 0.015 |
| BXD011 | -0.475 | -0.511 |
| BXD03 | -0.474 | 0.09 |
| BXD04 | -0.461 | 0.056 |
| BXD05 | -0.053 | 0.28 |
| BXD06 | -0.236 | -0.233 |
| BXD07 | -0.245 | 0.207 |
| BXD08 | -0.141 | 0.337 |
| BXD09 | -0.434 | 0.182 |
| CAST | -0.167 | 0.153 |
| CCcont | -0.54 | -0.124 |
| DS01 | -0.084 | -0.648 |
| DS02 | -0.435 | -0.564 |
| DS04 | 0.555 | 0.066 |
| DS0c | 0.217 | -0.728 |
| GP01 | -0.221 | 0.147 |
| GP02 | 0.269 | 0.48 |
| GP0c | 0.156 | 0.258 |
| NOD | -0.612 | -0.583 |
| NZO | 0.247 | 0.155 |
| PWK | -0.117 | 0.131 |
| H37Rv_KO_CtpC | -0.265 | 0.291 |
| H37Rv_KO_CtpD | -0.029 | 0.58 |
| H37Rv_KO_Rv1272 | -0.541 | 0.016 |
| H37Rv_KO_SugABC | 0.567 | 0.578 |
| H37Rv_KO_MbtN | -0.473 | 0.271 |
| Trans05 | -0.382 | -0.015 |
| macrophage_unactivated | 0.047 | 0.0 |
| IL1 | -0.439 | -0.492 |
| Rapamycin | 0.021 | 0.0 |
| Tcell | -0.222 | -0.489 |
| GMCSF | -0.499 | 0.037 |
| IFNab | 0.175 | -0.408 |
| IFNg | -0.575 | -0.532 |
| IFNg_GMCSF1 | -0.239 | -0.091 |
| Rv1432_day32 | 0.518 | 0.944 |
| Rv1565c_day32 | -0.073 | -0.99 |
| secA2_input | -0.106 | 0.225 |
| delta_Rv3594 | -0.194 | 0.037 |
| delta_Rv3717 | 0.092 | -0.286 |
| delta_Rv3811 | 0.126 | 0.21 |
| delta_Rv0954 | 0.043 | -0.081 |
| PonA1 | 0.306 | 0.097 |
| EccD1_KO | 1.006 | -0.122 |
| EspI_KO | 0.436 | 0.137 |
| PE35_KO | 0.21 | -0.184 |
| PPE68_KO | 0.25 | -0.202 |
| glycerol2 | 0.509 | 0.315 |
| lignocerate | 0.217 | 0.293 |
| oleate | 0.594 | 0.225 |
| phosphatidylcholine | 0.979 | 0.246 |
| acetate | -0.451 | 0.321 |
| glucAc | -0.25 | 0.329 |
| Rv0950ko | 0.684 | 0.6 |
| Rv1096ko | 0.645 | 0.739 |
| Rv3684ko | 0.616 | 0.498 |
| delta_otsA_trehalose | -1.076 | -1.604 |