Top 10 genes with highest correlation to Rv3736/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3056/dinP | (cc=0.5495) | info on Rv3056/dinP |
| Rv2490c/PE_PGRS43 | (cc=0.5169) | info on Rv2490c/PE_PGRS43 |
| Rv1706c/PPE23 | (cc=0.5101) | info on Rv1706c/PPE23 |
| Rv0834c/PE_PGRS14 | (cc=0.495) | info on Rv0834c/PE_PGRS14 |
| Rv3289c/- | (cc=0.4906) | info on Rv3289c/- |
| Rv2159c/- | (cc=0.4808) | info on Rv2159c/- |
| Rv2590/fadD9 | (cc=0.4779) | info on Rv2590/fadD9 |
| Rv2062c/cobN | (cc=0.4725) | info on Rv2062c/cobN |
| Rv3448/eccD4 | (cc=0.4712) | info on Rv3448/eccD4 |
| Rv3026c/- | (cc=0.467) | info on Rv3026c/- |
Correlation of Rv3736/- with Rv1706c/PPE23
Normalized LFCs for Rv3736/-:
(description and provenance of datasets)
| Rv3736/- | Rv1706c/PPE23 | |
| Fe_supp_jason_reseq | -1.176 | -0.759 |
| low_pH_jason_reseq | -0.206 | -0.356 |
| NO_jason_reseq | -0.31 | 0.011 |
| B6_jason_reseq | -0.605 | -0.189 |
| MHCII_jason_reseq | -0.367 | -0.046 |
| Isoniazid02 | -0.068 | 0.806 |
| Rifampicin4 | 0.108 | 0.298 |
| Ethambutol3 | 0.338 | 0.345 |
| Meropenem3 | 0.345 | 0.098 |
| Vancomycin16 | -0.109 | 0.188 |
| Rv2680_day32 | -0.095 | -0.618 |
| H37Rv_KO_MarP | 0.214 | -0.195 |
| hypoxia_3wks | -0.506 | 0.395 |
| hypoxia_6wks | -0.338 | -0.203 |
| glycerol | 0.265 | -1.1 |
| cholesterol | -0.11 | -0.975 |
| AJ | 1.049 | 0.084 |
| Bibs02 | 0.077 | -0.13 |
| Bibs02c | 0.171 | -0.553 |
| BL6 | -0.06 | -0.244 |
| BL6a | -0.253 | -0.693 |
| BXD01 | -0.45 | -0.38 |
| BXD010 | -0.305 | 0.04 |
| BXD011 | -0.475 | -0.244 |
| BXD03 | -0.474 | -0.33 |
| BXD04 | -0.461 | 0.02 |
| BXD05 | -0.053 | -0.159 |
| BXD06 | -0.236 | -0.527 |
| BXD07 | -0.245 | -0.03 |
| BXD08 | -0.141 | -0.251 |
| BXD09 | -0.434 | -0.475 |
| CAST | -0.167 | -0.03 |
| CCcont | -0.54 | -0.596 |
| DS01 | -0.084 | -0.407 |
| DS02 | -0.435 | -0.143 |
| DS04 | 0.555 | -0.607 |
| DS0c | 0.217 | -0.841 |
| GP01 | -0.221 | 0.483 |
| GP02 | 0.269 | 0.118 |
| GP0c | 0.156 | 0.034 |
| NOD | -0.612 | -0.272 |
| NZO | 0.247 | 0.236 |
| PWK | -0.117 | -0.026 |
| H37Rv_KO_CtpC | -0.265 | -0.22 |
| H37Rv_KO_CtpD | -0.029 | 0.441 |
| H37Rv_KO_Rv1272 | -0.541 | -0.325 |
| H37Rv_KO_SugABC | 0.567 | -0.159 |
| H37Rv_KO_MbtN | -0.473 | -0.073 |
| Trans05 | -0.382 | -0.605 |
| macrophage_unactivated | 0.047 | 0.584 |
| IL1 | -0.439 | 0.062 |
| Rapamycin | 0.021 | -0.104 |
| Tcell | -0.222 | 0.277 |
| GMCSF | -0.499 | 0.0 |
| IFNab | 0.175 | 0.1 |
| IFNg | -0.575 | -0.035 |
| IFNg_GMCSF1 | -0.239 | 0.041 |
| Rv1432_day32 | 0.518 | 0.074 |
| Rv1565c_day32 | -0.073 | 0.482 |
| secA2_input | -0.106 | -0.291 |
| delta_Rv3594 | -0.194 | -0.28 |
| delta_Rv3717 | 0.092 | 0.154 |
| delta_Rv3811 | 0.126 | 0.213 |
| delta_Rv0954 | 0.043 | 0.698 |
| PonA1 | 0.306 | 0.357 |
| EccD1_KO | 1.006 | 0.872 |
| EspI_KO | 0.436 | 1.067 |
| PE35_KO | 0.21 | 1.091 |
| PPE68_KO | 0.25 | 0.554 |
| glycerol2 | 0.509 | 0.511 |
| lignocerate | 0.217 | 0.281 |
| oleate | 0.594 | 0.852 |
| phosphatidylcholine | 0.979 | 0.725 |
| acetate | -0.451 | -0.09 |
| glucAc | -0.25 | -0.409 |
| Rv0950ko | 0.684 | 0.859 |
| Rv1096ko | 0.645 | 0.38 |
| Rv3684ko | 0.616 | 0.298 |
| delta_otsA_trehalose | -1.076 | -1.326 |