Top 10 genes with highest correlation to Rv3717/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0994/moeA1 | (cc=0.7731) | info on Rv0994/moeA1 |
| Rv3005c/- | (cc=0.7057) | info on Rv3005c/- |
| Rv0436c/pssA | (cc=0.6912) | info on Rv0436c/pssA |
| Rv2525c/- | (cc=0.6795) | info on Rv2525c/- |
| Rv1698/mctB | (cc=0.6707) | info on Rv1698/mctB |
| Rv1220c/- | (cc=0.6629) | info on Rv1220c/- |
| Rv0437c/psd | (cc=0.6433) | info on Rv0437c/psd |
| Rv2051c/ppm1 | (cc=0.5933) | info on Rv2051c/ppm1 |
| Rv3139/fadE24 | (cc=0.5882) | info on Rv3139/fadE24 |
| Rv1006/- | (cc=0.5615) | info on Rv1006/- |
Correlation of Rv3717/- with Rv0994/moeA1
Normalized LFCs for Rv3717/-:
(description and provenance of datasets)
| Rv3717/- | Rv0994/moeA1 | |
| Fe_supp_jason_reseq | -0.519 | -0.559 |
| low_pH_jason_reseq | -1.932 | -4.603 |
| NO_jason_reseq | -0.281 | -2.371 |
| B6_jason_reseq | -2.804 | -3.282 |
| MHCII_jason_reseq | -1.818 | -1.968 |
| Isoniazid02 | 1.168 | 1.762 |
| Rifampicin4 | -6.0 | -6.0 |
| Ethambutol3 | -0.287 | -0.683 |
| Meropenem3 | -2.356 | -3.435 |
| Vancomycin16 | -6.0 | -6.0 |
| Rv2680_day32 | -3.189 | -2.48 |
| H37Rv_KO_MarP | -0.351 | -4.936 |
| hypoxia_3wks | -3.194 | -3.537 |
| hypoxia_6wks | -2.443 | -4.475 |
| glycerol | -0.56 | 0.635 |
| cholesterol | 0.614 | 2.24 |
| AJ | -1.849 | -3.387 |
| Bibs02 | 1.507 | 0.701 |
| Bibs02c | -0.781 | 0.771 |
| BL6 | -0.497 | -1.158 |
| BL6a | -0.891 | -1.995 |
| BXD01 | -1.981 | -2.963 |
| BXD010 | -1.612 | -2.049 |
| BXD011 | -0.923 | -2.485 |
| BXD03 | -0.573 | -2.38 |
| BXD04 | -1.032 | -2.412 |
| BXD05 | -1.072 | -2.625 |
| BXD06 | -1.114 | -1.272 |
| BXD07 | -1.451 | -3.024 |
| BXD08 | -1.527 | -2.42 |
| BXD09 | -1.346 | -2.741 |
| CAST | -3.68 | -3.684 |
| CCcont | 1.67 | 0.079 |
| DS01 | 1.732 | 0.587 |
| DS02 | 1.068 | 0.665 |
| DS04 | -0.822 | -0.245 |
| DS0c | 0.79 | 0.024 |
| GP01 | -0.617 | -1.998 |
| GP02 | -1.33 | -1.817 |
| GP0c | -1.136 | -2.631 |
| NOD | -2.579 | -2.262 |
| NZO | -1.743 | -3.891 |
| PWK | -2.585 | -3.342 |
| H37Rv_KO_CtpC | 0.85 | -0.437 |
| H37Rv_KO_CtpD | 0.085 | 0.612 |
| H37Rv_KO_Rv1272 | -1.548 | -2.656 |
| H37Rv_KO_SugABC | -0.906 | -1.744 |
| H37Rv_KO_MbtN | -0.783 | -0.399 |
| Trans05 | -1.141 | -1.797 |
| macrophage_unactivated | -0.104 | -0.303 |
| IL1 | -0.685 | -1.186 |
| Rapamycin | 0.822 | -0.779 |
| Tcell | -0.753 | -1.404 |
| GMCSF | 0.636 | -0.895 |
| IFNab | 1.013 | -0.218 |
| IFNg | -1.109 | -2.205 |
| IFNg_GMCSF1 | -2.049 | -2.341 |
| Rv1432_day32 | -2.854 | -3.139 |
| Rv1565c_day32 | -1.515 | -2.019 |
| secA2_input | 1.677 | 0.374 |
| delta_Rv3594 | 0.456 | -1.366 |
| delta_Rv3717 | -3.861 | -0.999 |
| delta_Rv3811 | 0.378 | -0.674 |
| delta_Rv0954 | -0.142 | -0.508 |
| PonA1 | 1.084 | -0.454 |
| EccD1_KO | -0.355 | 0.776 |
| EspI_KO | -0.308 | 0.436 |
| PE35_KO | -0.026 | 0.977 |
| PPE68_KO | -0.227 | 0.79 |
| glycerol2 | -0.437 | 0.914 |
| lignocerate | -0.207 | -0.424 |
| oleate | -1.418 | -0.315 |
| phosphatidylcholine | -1.188 | -0.679 |
| acetate | 0.74 | -0.178 |
| glucAc | 0.429 | -0.229 |
| Rv0950ko | -0.175 | 0.377 |
| Rv1096ko | 0.947 | 0.666 |
| Rv3684ko | 0.029 | -0.144 |
| delta_otsA_trehalose | -0.101 | 0.368 |