Top 10 genes with highest correlation to Rv3663c/dppD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.4672) | info on Rv0233/nrdB |
| Rv3480c/- | (cc=0.4584) | info on Rv3480c/- |
| Rv2718c/nrdR | (cc=0.4564) | info on Rv2718c/nrdR |
| Rv3733c/- | (cc=0.4345) | info on Rv3733c/- |
| Rv2466c/- | (cc=0.4218) | info on Rv2466c/- |
| Rv2601/speE | (cc=0.4198) | info on Rv2601/speE |
| Rv0095c/- | (cc=0.4077) | info on Rv0095c/- |
| Rv1815/- | (cc=0.4045) | info on Rv1815/- |
| Rv1681/moeX | (cc=0.4031) | info on Rv1681/moeX |
| Rv0392c/ndhA | (cc=0.4023) | info on Rv0392c/ndhA |
Correlation of Rv3663c/dppD with Rv3733c/-
Normalized LFCs for Rv3663c/dppD:
(description and provenance of datasets)
| Rv3663c/dppD | Rv3733c/- | |
| Fe_supp_jason_reseq | 0.066 | -0.106 |
| low_pH_jason_reseq | 1.527 | 0.02 |
| NO_jason_reseq | 0.11 | 0.299 |
| B6_jason_reseq | -0.048 | 0.311 |
| MHCII_jason_reseq | 1.858 | 0.778 |
| Isoniazid02 | 0.314 | 1.387 |
| Rifampicin4 | -0.688 | 0.135 |
| Ethambutol3 | 0.162 | 0.552 |
| Meropenem3 | 0.159 | -0.363 |
| Vancomycin16 | -0.39 | -0.175 |
| Rv2680_day32 | 0.779 | 1.566 |
| H37Rv_KO_MarP | 0.512 | 0.382 |
| hypoxia_3wks | -0.606 | 0.167 |
| hypoxia_6wks | -0.969 | -0.635 |
| glycerol | 1.104 | 0.298 |
| cholesterol | 0.233 | -0.283 |
| AJ | -0.103 | -0.766 |
| Bibs02 | 0.328 | 0.229 |
| Bibs02c | 0.0 | -0.535 |
| BL6 | 0.027 | -0.59 |
| BL6a | -0.713 | 0.125 |
| BXD01 | -0.214 | -0.198 |
| BXD010 | -0.543 | 0.315 |
| BXD011 | -0.626 | 0.454 |
| BXD03 | -0.407 | -0.108 |
| BXD04 | 0.542 | -0.535 |
| BXD05 | -0.758 | 0.533 |
| BXD06 | -0.326 | 0.163 |
| BXD07 | -0.03 | -0.093 |
| BXD08 | -0.75 | -0.073 |
| BXD09 | -0.343 | 0.047 |
| CAST | -0.155 | 0.045 |
| CCcont | -0.407 | -0.092 |
| DS01 | 1.068 | 0.643 |
| DS02 | 0.792 | -0.032 |
| DS04 | -0.086 | -0.308 |
| DS0c | 1.012 | 0.572 |
| GP01 | -0.451 | -0.52 |
| GP02 | -1.011 | -0.984 |
| GP0c | -0.317 | 0.199 |
| NOD | -0.612 | 0.553 |
| NZO | -0.433 | -0.675 |
| PWK | 0.59 | 0.655 |
| H37Rv_KO_CtpC | -1.404 | -2.039 |
| H37Rv_KO_CtpD | -0.241 | -0.117 |
| H37Rv_KO_Rv1272 | -1.446 | -0.585 |
| H37Rv_KO_SugABC | -0.114 | 0.486 |
| H37Rv_KO_MbtN | -1.118 | -1.904 |
| Trans05 | -0.319 | -0.14 |
| macrophage_unactivated | -0.701 | -0.609 |
| IL1 | -1.614 | -0.617 |
| Rapamycin | -0.988 | -1.065 |
| Tcell | -1.049 | -0.59 |
| GMCSF | 2.474 | 0.393 |
| IFNab | -0.529 | -0.986 |
| IFNg | -0.345 | 0.345 |
| IFNg_GMCSF1 | -0.852 | 0.132 |
| Rv1432_day32 | 0.0 | 0.789 |
| Rv1565c_day32 | 0.392 | 0.306 |
| secA2_input | -0.21 | 0.207 |
| delta_Rv3594 | 0.635 | -1.111 |
| delta_Rv3717 | -0.365 | -1.313 |
| delta_Rv3811 | 0.976 | -1.575 |
| delta_Rv0954 | 0.45 | -1.452 |
| PonA1 | 0.402 | -1.047 |
| EccD1_KO | -0.832 | -0.48 |
| EspI_KO | -0.385 | 0.784 |
| PE35_KO | 0.219 | 0.204 |
| PPE68_KO | -0.432 | 0.0 |
| glycerol2 | -1.37 | -0.815 |
| lignocerate | -0.726 | -0.951 |
| oleate | -0.893 | -1.188 |
| phosphatidylcholine | -0.655 | -0.84 |
| acetate | -0.778 | -1.428 |
| glucAc | -0.516 | -1.135 |
| Rv0950ko | -0.217 | 0.965 |
| Rv1096ko | 0.208 | 0.422 |
| Rv3684ko | 0.115 | -0.052 |
| delta_otsA_trehalose | 1.275 | 1.719 |