Top 10 genes with highest correlation to Rv3663c/dppD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.4672) | info on Rv0233/nrdB |
| Rv3480c/- | (cc=0.4584) | info on Rv3480c/- |
| Rv2718c/nrdR | (cc=0.4564) | info on Rv2718c/nrdR |
| Rv3733c/- | (cc=0.4345) | info on Rv3733c/- |
| Rv2466c/- | (cc=0.4218) | info on Rv2466c/- |
| Rv2601/speE | (cc=0.4198) | info on Rv2601/speE |
| Rv0095c/- | (cc=0.4077) | info on Rv0095c/- |
| Rv1815/- | (cc=0.4045) | info on Rv1815/- |
| Rv1681/moeX | (cc=0.4031) | info on Rv1681/moeX |
| Rv0392c/ndhA | (cc=0.4023) | info on Rv0392c/ndhA |
Correlation of Rv3663c/dppD with Rv1815/-
Normalized LFCs for Rv3663c/dppD:
(description and provenance of datasets)
| Rv3663c/dppD | Rv1815/- | |
| Fe_supp_jason_reseq | 0.066 | 1.187 |
| low_pH_jason_reseq | 1.527 | -0.681 |
| NO_jason_reseq | 0.11 | -0.895 |
| B6_jason_reseq | -0.048 | 0.908 |
| MHCII_jason_reseq | 1.858 | 2.027 |
| Isoniazid02 | 0.314 | 0.473 |
| Rifampicin4 | -0.688 | -0.885 |
| Ethambutol3 | 0.162 | 0.722 |
| Meropenem3 | 0.159 | -0.37 |
| Vancomycin16 | -0.39 | -1.114 |
| Rv2680_day32 | 0.779 | -0.86 |
| H37Rv_KO_MarP | 0.512 | 0.382 |
| hypoxia_3wks | -0.606 | -0.77 |
| hypoxia_6wks | -0.969 | -0.025 |
| glycerol | 1.104 | -0.632 |
| cholesterol | 0.233 | -0.294 |
| AJ | -0.103 | 0.37 |
| Bibs02 | 0.328 | 1.209 |
| Bibs02c | 0.0 | 1.228 |
| BL6 | 0.027 | -0.351 |
| BL6a | -0.713 | 0.495 |
| BXD01 | -0.214 | -1.049 |
| BXD010 | -0.543 | -1.936 |
| BXD011 | -0.626 | -1.246 |
| BXD03 | -0.407 | -0.695 |
| BXD04 | 0.542 | -1.959 |
| BXD05 | -0.758 | -1.901 |
| BXD06 | -0.326 | -1.292 |
| BXD07 | -0.03 | -1.714 |
| BXD08 | -0.75 | -0.991 |
| BXD09 | -0.343 | -1.12 |
| CAST | -0.155 | -1.183 |
| CCcont | -0.407 | -1.051 |
| DS01 | 1.068 | 0.546 |
| DS02 | 0.792 | -0.43 |
| DS04 | -0.086 | 0.063 |
| DS0c | 1.012 | 1.105 |
| GP01 | -0.451 | -0.849 |
| GP02 | -1.011 | -0.685 |
| GP0c | -0.317 | -0.739 |
| NOD | -0.612 | 0.482 |
| NZO | -0.433 | -0.243 |
| PWK | 0.59 | -0.065 |
| H37Rv_KO_CtpC | -1.404 | -1.624 |
| H37Rv_KO_CtpD | -0.241 | 0.743 |
| H37Rv_KO_Rv1272 | -1.446 | -0.433 |
| H37Rv_KO_SugABC | -0.114 | 0.02 |
| H37Rv_KO_MbtN | -1.118 | -0.848 |
| Trans05 | -0.319 | 0.409 |
| macrophage_unactivated | -0.701 | -2.778 |
| IL1 | -1.614 | -0.97 |
| Rapamycin | -0.988 | -1.7 |
| Tcell | -1.049 | -2.623 |
| GMCSF | 2.474 | -0.76 |
| IFNab | -0.529 | -2.113 |
| IFNg | -0.345 | -0.444 |
| IFNg_GMCSF1 | -0.852 | -0.672 |
| Rv1432_day32 | 0.0 | -0.289 |
| Rv1565c_day32 | 0.392 | 1.071 |
| secA2_input | -0.21 | -0.305 |
| delta_Rv3594 | 0.635 | -0.092 |
| delta_Rv3717 | -0.365 | 0.584 |
| delta_Rv3811 | 0.976 | 0.22 |
| delta_Rv0954 | 0.45 | 0.057 |
| PonA1 | 0.402 | -0.471 |
| EccD1_KO | -0.832 | -0.97 |
| EspI_KO | -0.385 | -0.399 |
| PE35_KO | 0.219 | 0.19 |
| PPE68_KO | -0.432 | 0.058 |
| glycerol2 | -1.37 | -1.047 |
| lignocerate | -0.726 | -0.585 |
| oleate | -0.893 | -1.093 |
| phosphatidylcholine | -0.655 | -1.08 |
| acetate | -0.778 | 0.339 |
| glucAc | -0.516 | -0.016 |
| Rv0950ko | -0.217 | 0.103 |
| Rv1096ko | 0.208 | -1.224 |
| Rv3684ko | 0.115 | -1.241 |
| delta_otsA_trehalose | 1.275 | 0.495 |