Top 10 genes with highest correlation to Rv3663c/dppD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0233/nrdB | (cc=0.4672) | info on Rv0233/nrdB |
| Rv3480c/- | (cc=0.4584) | info on Rv3480c/- |
| Rv2718c/nrdR | (cc=0.4564) | info on Rv2718c/nrdR |
| Rv3733c/- | (cc=0.4345) | info on Rv3733c/- |
| Rv2466c/- | (cc=0.4218) | info on Rv2466c/- |
| Rv2601/speE | (cc=0.4198) | info on Rv2601/speE |
| Rv0095c/- | (cc=0.4077) | info on Rv0095c/- |
| Rv1815/- | (cc=0.4045) | info on Rv1815/- |
| Rv1681/moeX | (cc=0.4031) | info on Rv1681/moeX |
| Rv0392c/ndhA | (cc=0.4023) | info on Rv0392c/ndhA |
Correlation of Rv3663c/dppD with Rv2466c/-
Normalized LFCs for Rv3663c/dppD:
(description and provenance of datasets)
| Rv3663c/dppD | Rv2466c/- | |
| Fe_supp_jason_reseq | 0.066 | 1.149 |
| low_pH_jason_reseq | 1.527 | 0.534 |
| NO_jason_reseq | 0.11 | -1.536 |
| B6_jason_reseq | -0.048 | 1.058 |
| MHCII_jason_reseq | 1.858 | 1.613 |
| Isoniazid02 | 0.314 | 0.537 |
| Rifampicin4 | -0.688 | -0.049 |
| Ethambutol3 | 0.162 | 0.627 |
| Meropenem3 | 0.159 | 0.442 |
| Vancomycin16 | -0.39 | 0.456 |
| Rv2680_day32 | 0.779 | 1.863 |
| H37Rv_KO_MarP | 0.512 | -0.31 |
| hypoxia_3wks | -0.606 | 0.698 |
| hypoxia_6wks | -0.969 | 0.814 |
| glycerol | 1.104 | 0.837 |
| cholesterol | 0.233 | 0.198 |
| AJ | -0.103 | -0.049 |
| Bibs02 | 0.328 | 0.616 |
| Bibs02c | 0.0 | -0.089 |
| BL6 | 0.027 | -0.238 |
| BL6a | -0.713 | -0.172 |
| BXD01 | -0.214 | -0.773 |
| BXD010 | -0.543 | -0.428 |
| BXD011 | -0.626 | -0.319 |
| BXD03 | -0.407 | -0.504 |
| BXD04 | 0.542 | -0.563 |
| BXD05 | -0.758 | -0.314 |
| BXD06 | -0.326 | -0.067 |
| BXD07 | -0.03 | -0.544 |
| BXD08 | -0.75 | -1.001 |
| BXD09 | -0.343 | -0.07 |
| CAST | -0.155 | -0.167 |
| CCcont | -0.407 | -0.401 |
| DS01 | 1.068 | 0.113 |
| DS02 | 0.792 | 0.377 |
| DS04 | -0.086 | 0.533 |
| DS0c | 1.012 | 1.094 |
| GP01 | -0.451 | 0.454 |
| GP02 | -1.011 | 0.42 |
| GP0c | -0.317 | -0.326 |
| NOD | -0.612 | -0.129 |
| NZO | -0.433 | 0.415 |
| PWK | 0.59 | -0.186 |
| H37Rv_KO_CtpC | -1.404 | -1.419 |
| H37Rv_KO_CtpD | -0.241 | -0.577 |
| H37Rv_KO_Rv1272 | -1.446 | -2.473 |
| H37Rv_KO_SugABC | -0.114 | -1.941 |
| H37Rv_KO_MbtN | -1.118 | -0.249 |
| Trans05 | -0.319 | 0.38 |
| macrophage_unactivated | -0.701 | -0.773 |
| IL1 | -1.614 | -0.303 |
| Rapamycin | -0.988 | -0.031 |
| Tcell | -1.049 | -0.798 |
| GMCSF | 2.474 | 0.177 |
| IFNab | -0.529 | 0.0 |
| IFNg | -0.345 | -0.414 |
| IFNg_GMCSF1 | -0.852 | -0.031 |
| Rv1432_day32 | 0.0 | 0.171 |
| Rv1565c_day32 | 0.392 | -0.218 |
| secA2_input | -0.21 | -2.736 |
| delta_Rv3594 | 0.635 | -0.493 |
| delta_Rv3717 | -0.365 | 0.181 |
| delta_Rv3811 | 0.976 | 0.119 |
| delta_Rv0954 | 0.45 | -0.602 |
| PonA1 | 0.402 | 0.277 |
| EccD1_KO | -0.832 | -0.187 |
| EspI_KO | -0.385 | 0.95 |
| PE35_KO | 0.219 | -0.47 |
| PPE68_KO | -0.432 | -0.045 |
| glycerol2 | -1.37 | -0.357 |
| lignocerate | -0.726 | -0.051 |
| oleate | -0.893 | -0.716 |
| phosphatidylcholine | -0.655 | -0.16 |
| acetate | -0.778 | -0.093 |
| glucAc | -0.516 | 0.123 |
| Rv0950ko | -0.217 | -0.286 |
| Rv1096ko | 0.208 | 0.727 |
| Rv3684ko | 0.115 | 0.897 |
| delta_otsA_trehalose | 1.275 | 1.829 |