Top 10 genes with highest correlation to Rv3614c/espD:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3615c/espC | (cc=0.9176) | info on Rv3615c/espC |
| Rv3870/eccCa1 | (cc=0.9023) | info on Rv3870/eccCa1 |
| Rv3616c/espA | (cc=0.9018) | info on Rv3616c/espA |
| Rv3883c/mycP1 | (cc=0.9012) | info on Rv3883c/mycP1 |
| Rv3871/eccCb1 | (cc=0.8931) | info on Rv3871/eccCb1 |
| Rv3869/eccB1 | (cc=0.8765) | info on Rv3869/eccB1 |
| Rv3882c/eccE1 | (cc=0.8731) | info on Rv3882c/eccE1 |
| Rv3551/- | (cc=0.8426) | info on Rv3551/- |
| Rv3877/eccD1 | (cc=0.8357) | info on Rv3877/eccD1 |
| Rv3400/- | (cc=0.8333) | info on Rv3400/- |
Correlation of Rv3614c/espD with Rv3615c/espC
Normalized LFCs for Rv3614c/espD:
(description and provenance of datasets)
| Rv3614c/espD | Rv3615c/espC | |
| Fe_supp_jason_reseq | -0.587 | -0.076 |
| low_pH_jason_reseq | -0.668 | -0.791 |
| NO_jason_reseq | -0.795 | -0.179 |
| B6_jason_reseq | -2.337 | -2.738 |
| MHCII_jason_reseq | -2.243 | -3.219 |
| Isoniazid02 | 0.007 | -1.534 |
| Rifampicin4 | -0.187 | 0.663 |
| Ethambutol3 | 0.499 | 0.61 |
| Meropenem3 | 0.052 | -0.927 |
| Vancomycin16 | 0.013 | -0.438 |
| Rv2680_day32 | -1.55 | -2.287 |
| H37Rv_KO_MarP | 1.281 | 0.763 |
| hypoxia_3wks | -0.159 | -0.642 |
| hypoxia_6wks | -1.084 | -0.453 |
| glycerol | -1.3 | -1.542 |
| cholesterol | -0.729 | -2.127 |
| AJ | -5.192 | -4.615 |
| Bibs02 | -5.457 | -6.0 |
| Bibs02c | -4.547 | -5.515 |
| BL6 | -1.299 | -1.925 |
| BL6a | -4.873 | -4.038 |
| BXD01 | -2.886 | -2.432 |
| BXD010 | -2.241 | -1.317 |
| BXD011 | -2.548 | -2.379 |
| BXD03 | -2.31 | -2.734 |
| BXD04 | -2.767 | -1.094 |
| BXD05 | -1.613 | -2.385 |
| BXD06 | -2.794 | -3.264 |
| BXD07 | -2.523 | -2.435 |
| BXD08 | -3.347 | -3.429 |
| BXD09 | -3.276 | -3.21 |
| CAST | -3.997 | -4.656 |
| CCcont | -0.378 | 0.08 |
| DS01 | -6.0 | -5.297 |
| DS02 | -6.0 | -6.0 |
| DS04 | -3.847 | -3.797 |
| DS0c | -5.276 | -6.0 |
| GP01 | -1.875 | -1.918 |
| GP02 | -2.344 | -2.771 |
| GP0c | -1.179 | -0.687 |
| NOD | 0.153 | -0.556 |
| NZO | -6.0 | -4.599 |
| PWK | -4.825 | -5.419 |
| H37Rv_KO_CtpC | -1.587 | -1.589 |
| H37Rv_KO_CtpD | -1.102 | -0.43 |
| H37Rv_KO_Rv1272 | -1.097 | -1.432 |
| H37Rv_KO_SugABC | -2.464 | -1.494 |
| H37Rv_KO_MbtN | 0.817 | 0.721 |
| Trans05 | -0.72 | -1.485 |
| macrophage_unactivated | -0.218 | -1.203 |
| IL1 | -0.148 | -0.303 |
| Rapamycin | -0.672 | -0.761 |
| Tcell | -1.235 | -2.278 |
| GMCSF | 0.016 | 0.887 |
| IFNab | 1.128 | 0.629 |
| IFNg | -1.098 | -1.924 |
| IFNg_GMCSF1 | 0.682 | -1.304 |
| Rv1432_day32 | -1.13 | -2.181 |
| Rv1565c_day32 | -3.097 | -3.023 |
| secA2_input | -0.873 | 0.844 |
| delta_Rv3594 | 0.242 | 0.45 |
| delta_Rv3717 | -0.596 | -0.276 |
| delta_Rv3811 | -0.433 | -0.611 |
| delta_Rv0954 | -0.437 | 0.062 |
| PonA1 | -1.641 | -1.032 |
| EccD1_KO | 0.572 | -0.247 |
| EspI_KO | 1.514 | -0.639 |
| PE35_KO | 1.082 | -0.096 |
| PPE68_KO | 1.222 | -0.403 |
| glycerol2 | 1.184 | 0.556 |
| lignocerate | 0.6 | 0.544 |
| oleate | 1.136 | -0.103 |
| phosphatidylcholine | 0.262 | -0.066 |
| acetate | -0.153 | -0.146 |
| glucAc | -0.228 | -0.122 |
| Rv0950ko | 0.485 | -0.256 |
| Rv1096ko | -0.6 | -1.122 |
| Rv3684ko | -0.766 | -0.668 |
| delta_otsA_trehalose | 0.89 | 1.448 |