Top 10 genes with highest correlation to Rv3600c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3045/adhC | (cc=0.5849) | info on Rv3045/adhC |
| Rv3891c/esxD | (cc=0.511) | info on Rv3891c/esxD |
| Rv2299c/htpG | (cc=0.4844) | info on Rv2299c/htpG |
| Rv0407/fgd1 | (cc=0.4809) | info on Rv0407/fgd1 |
| Rv3133c/devR | (cc=0.4536) | info on Rv3133c/devR |
| Rv0009/ppiA | (cc=0.4502) | info on Rv0009/ppiA |
| Rv2031c/hspX | (cc=0.4362) | info on Rv2031c/hspX |
| Rv3293/pcd | (cc=0.4256) | info on Rv3293/pcd |
| Rv1691/- | (cc=0.4211) | info on Rv1691/- |
| Rv1069c/- | (cc=0.4152) | info on Rv1069c/- |
Correlation of Rv3600c/- with Rv3891c/esxD
Normalized LFCs for Rv3600c/-:
(description and provenance of datasets)
| Rv3600c/- | Rv3891c/esxD | |
| Fe_supp_jason_reseq | 1.077 | 1.152 |
| low_pH_jason_reseq | 1.623 | 0.217 |
| NO_jason_reseq | 0.782 | 0.045 |
| B6_jason_reseq | 1.175 | 1.296 |
| MHCII_jason_reseq | 1.194 | 0.694 |
| Isoniazid02 | -2.734 | -0.247 |
| Rifampicin4 | -1.189 | -1.841 |
| Ethambutol3 | 0.083 | -0.371 |
| Meropenem3 | -1.592 | -0.66 |
| Vancomycin16 | 0.52 | -0.684 |
| Rv2680_day32 | 1.45 | 1.323 |
| H37Rv_KO_MarP | 0.794 | 0.171 |
| hypoxia_3wks | -4.135 | -1.101 |
| hypoxia_6wks | -3.773 | -1.163 |
| glycerol | 1.198 | -0.152 |
| cholesterol | 0.85 | -0.367 |
| AJ | 0.165 | -0.155 |
| Bibs02 | 0.595 | 0.589 |
| Bibs02c | 0.503 | 1.566 |
| BL6 | 0.361 | 0.078 |
| BL6a | 0.661 | 0.903 |
| BXD01 | 0.48 | 0.333 |
| BXD010 | 0.046 | 0.294 |
| BXD011 | 0.256 | 0.01 |
| BXD03 | -0.423 | -0.011 |
| BXD04 | 0.158 | 1.005 |
| BXD05 | 0.672 | -0.09 |
| BXD06 | 0.281 | 0.19 |
| BXD07 | 0.13 | -0.115 |
| BXD08 | 0.433 | -0.021 |
| BXD09 | 0.543 | 0.341 |
| CAST | -0.609 | -0.359 |
| CCcont | 1.026 | 0.592 |
| DS01 | 1.215 | 1.482 |
| DS02 | 0.876 | 1.068 |
| DS04 | 0.732 | 0.982 |
| DS0c | 1.163 | 1.732 |
| GP01 | 0.572 | -1.384 |
| GP02 | 0.059 | -0.687 |
| GP0c | -0.1 | -0.265 |
| NOD | -0.142 | -0.018 |
| NZO | -0.318 | -0.348 |
| PWK | 0.0 | -0.517 |
| H37Rv_KO_CtpC | -1.412 | -1.399 |
| H37Rv_KO_CtpD | 1.936 | 1.54 |
| H37Rv_KO_Rv1272 | 0.225 | 1.055 |
| H37Rv_KO_SugABC | -1.267 | 0.737 |
| H37Rv_KO_MbtN | -0.194 | -0.086 |
| Trans05 | -0.476 | 1.239 |
| macrophage_unactivated | 1.054 | 0.467 |
| IL1 | -0.819 | 0.362 |
| Rapamycin | 0.0 | -0.224 |
| Tcell | -0.658 | 1.14 |
| GMCSF | -0.533 | -0.832 |
| IFNab | -0.193 | -0.952 |
| IFNg | -1.165 | -0.569 |
| IFNg_GMCSF1 | -0.635 | -0.229 |
| Rv1432_day32 | 1.008 | 0.104 |
| Rv1565c_day32 | 1.399 | -0.092 |
| secA2_input | -0.064 | -0.393 |
| delta_Rv3594 | -0.101 | -0.482 |
| delta_Rv3717 | -0.055 | -0.101 |
| delta_Rv3811 | -0.628 | -0.486 |
| delta_Rv0954 | -1.765 | 0.11 |
| PonA1 | 1.348 | 1.154 |
| EccD1_KO | 0.171 | -0.585 |
| EspI_KO | 0.59 | -0.65 |
| PE35_KO | 0.735 | -0.691 |
| PPE68_KO | 0.627 | -0.65 |
| glycerol2 | -0.385 | 0.401 |
| lignocerate | 0.178 | 0.237 |
| oleate | -1.0 | -0.791 |
| phosphatidylcholine | 0.08 | 0.011 |
| acetate | 0.617 | -0.271 |
| glucAc | 0.598 | 0.36 |
| Rv0950ko | 1.034 | 1.399 |
| Rv1096ko | 0.546 | 1.2 |
| Rv3684ko | 0.927 | 0.252 |
| delta_otsA_trehalose | -0.459 | 0.064 |