Top 10 genes with highest correlation to Rv3600c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3045/adhC | (cc=0.5849) | info on Rv3045/adhC |
| Rv3891c/esxD | (cc=0.511) | info on Rv3891c/esxD |
| Rv2299c/htpG | (cc=0.4844) | info on Rv2299c/htpG |
| Rv0407/fgd1 | (cc=0.4809) | info on Rv0407/fgd1 |
| Rv3133c/devR | (cc=0.4536) | info on Rv3133c/devR |
| Rv0009/ppiA | (cc=0.4502) | info on Rv0009/ppiA |
| Rv2031c/hspX | (cc=0.4362) | info on Rv2031c/hspX |
| Rv3293/pcd | (cc=0.4256) | info on Rv3293/pcd |
| Rv1691/- | (cc=0.4211) | info on Rv1691/- |
| Rv1069c/- | (cc=0.4152) | info on Rv1069c/- |
Correlation of Rv3600c/- with Rv2031c/hspX
Normalized LFCs for Rv3600c/-:
(description and provenance of datasets)
| Rv3600c/- | Rv2031c/hspX | |
| Fe_supp_jason_reseq | 1.077 | -1.65 |
| low_pH_jason_reseq | 1.623 | 0.791 |
| NO_jason_reseq | 0.782 | 0.488 |
| B6_jason_reseq | 1.175 | -0.428 |
| MHCII_jason_reseq | 1.194 | -0.657 |
| Isoniazid02 | -2.734 | 0.384 |
| Rifampicin4 | -1.189 | 0.019 |
| Ethambutol3 | 0.083 | 0.687 |
| Meropenem3 | -1.592 | 0.816 |
| Vancomycin16 | 0.52 | 0.249 |
| Rv2680_day32 | 1.45 | 0.324 |
| H37Rv_KO_MarP | 0.794 | -0.365 |
| hypoxia_3wks | -4.135 | -5.834 |
| hypoxia_6wks | -3.773 | -6.0 |
| glycerol | 1.198 | 0.176 |
| cholesterol | 0.85 | -0.738 |
| AJ | 0.165 | 0.103 |
| Bibs02 | 0.595 | 0.225 |
| Bibs02c | 0.503 | 0.047 |
| BL6 | 0.361 | -2.461 |
| BL6a | 0.661 | -1.009 |
| BXD01 | 0.48 | -0.803 |
| BXD010 | 0.046 | 0.189 |
| BXD011 | 0.256 | -1.268 |
| BXD03 | -0.423 | -1.632 |
| BXD04 | 0.158 | -1.609 |
| BXD05 | 0.672 | -0.843 |
| BXD06 | 0.281 | -1.737 |
| BXD07 | 0.13 | -1.134 |
| BXD08 | 0.433 | -1.512 |
| BXD09 | 0.543 | -1.187 |
| CAST | -0.609 | -0.067 |
| CCcont | 1.026 | -1.884 |
| DS01 | 1.215 | -0.299 |
| DS02 | 0.876 | 0.487 |
| DS04 | 0.732 | -0.125 |
| DS0c | 1.163 | -0.823 |
| GP01 | 0.572 | -0.797 |
| GP02 | 0.059 | -1.019 |
| GP0c | -0.1 | -0.451 |
| NOD | -0.142 | 0.387 |
| NZO | -0.318 | -0.189 |
| PWK | 0.0 | -0.531 |
| H37Rv_KO_CtpC | -1.412 | -1.617 |
| H37Rv_KO_CtpD | 1.936 | -3.078 |
| H37Rv_KO_Rv1272 | 0.225 | -0.008 |
| H37Rv_KO_SugABC | -1.267 | 0.117 |
| H37Rv_KO_MbtN | -0.194 | -1.207 |
| Trans05 | -0.476 | 0.534 |
| macrophage_unactivated | 1.054 | -0.83 |
| IL1 | -0.819 | -2.45 |
| Rapamycin | 0.0 | -1.881 |
| Tcell | -0.658 | -1.73 |
| GMCSF | -0.533 | -1.471 |
| IFNab | -0.193 | -1.445 |
| IFNg | -1.165 | -1.871 |
| IFNg_GMCSF1 | -0.635 | -0.179 |
| Rv1432_day32 | 1.008 | 0.102 |
| Rv1565c_day32 | 1.399 | 1.529 |
| secA2_input | -0.064 | -1.182 |
| delta_Rv3594 | -0.101 | 0.698 |
| delta_Rv3717 | -0.055 | 0.958 |
| delta_Rv3811 | -0.628 | 0.442 |
| delta_Rv0954 | -1.765 | -0.266 |
| PonA1 | 1.348 | 0.223 |
| EccD1_KO | 0.171 | 0.513 |
| EspI_KO | 0.59 | 0.627 |
| PE35_KO | 0.735 | 1.689 |
| PPE68_KO | 0.627 | 1.043 |
| glycerol2 | -0.385 | -0.22 |
| lignocerate | 0.178 | -0.191 |
| oleate | -1.0 | -0.054 |
| phosphatidylcholine | 0.08 | -0.387 |
| acetate | 0.617 | -0.477 |
| glucAc | 0.598 | -0.931 |
| Rv0950ko | 1.034 | 0.244 |
| Rv1096ko | 0.546 | 0.196 |
| Rv3684ko | 0.927 | 0.704 |
| delta_otsA_trehalose | -0.459 | 0.032 |