Top 10 genes with highest correlation to Rv3600c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3045/adhC | (cc=0.5849) | info on Rv3045/adhC |
| Rv3891c/esxD | (cc=0.511) | info on Rv3891c/esxD |
| Rv2299c/htpG | (cc=0.4844) | info on Rv2299c/htpG |
| Rv0407/fgd1 | (cc=0.4809) | info on Rv0407/fgd1 |
| Rv3133c/devR | (cc=0.4536) | info on Rv3133c/devR |
| Rv0009/ppiA | (cc=0.4502) | info on Rv0009/ppiA |
| Rv2031c/hspX | (cc=0.4362) | info on Rv2031c/hspX |
| Rv3293/pcd | (cc=0.4256) | info on Rv3293/pcd |
| Rv1691/- | (cc=0.4211) | info on Rv1691/- |
| Rv1069c/- | (cc=0.4152) | info on Rv1069c/- |
Correlation of Rv3600c/- with Rv3133c/devR
Normalized LFCs for Rv3600c/-:
(description and provenance of datasets)
| Rv3600c/- | Rv3133c/devR | |
| Fe_supp_jason_reseq | 1.077 | 0.537 |
| low_pH_jason_reseq | 1.623 | 0.835 |
| NO_jason_reseq | 0.782 | -0.942 |
| B6_jason_reseq | 1.175 | 0.0 |
| MHCII_jason_reseq | 1.194 | -0.508 |
| Isoniazid02 | -2.734 | -1.094 |
| Rifampicin4 | -1.189 | 0.236 |
| Ethambutol3 | 0.083 | -1.127 |
| Meropenem3 | -1.592 | -0.622 |
| Vancomycin16 | 0.52 | -0.769 |
| Rv2680_day32 | 1.45 | -0.648 |
| H37Rv_KO_MarP | 0.794 | 0.337 |
| hypoxia_3wks | -4.135 | -6.0 |
| hypoxia_6wks | -3.773 | -6.0 |
| glycerol | 1.198 | 1.535 |
| cholesterol | 0.85 | 0.041 |
| AJ | 0.165 | 1.343 |
| Bibs02 | 0.595 | -0.026 |
| Bibs02c | 0.503 | 0.173 |
| BL6 | 0.361 | 1.344 |
| BL6a | 0.661 | 1.406 |
| BXD01 | 0.48 | 0.643 |
| BXD010 | 0.046 | 1.376 |
| BXD011 | 0.256 | 0.378 |
| BXD03 | -0.423 | 1.344 |
| BXD04 | 0.158 | 1.195 |
| BXD05 | 0.672 | 1.48 |
| BXD06 | 0.281 | 0.467 |
| BXD07 | 0.13 | 1.642 |
| BXD08 | 0.433 | 1.082 |
| BXD09 | 0.543 | 0.767 |
| CAST | -0.609 | 1.256 |
| CCcont | 1.026 | 0.64 |
| DS01 | 1.215 | -0.404 |
| DS02 | 0.876 | -1.0 |
| DS04 | 0.732 | 0.0 |
| DS0c | 1.163 | -1.42 |
| GP01 | 0.572 | 0.571 |
| GP02 | 0.059 | -0.481 |
| GP0c | -0.1 | 1.617 |
| NOD | -0.142 | 0.809 |
| NZO | -0.318 | -0.147 |
| PWK | 0.0 | -0.618 |
| H37Rv_KO_CtpC | -1.412 | 1.85 |
| H37Rv_KO_CtpD | 1.936 | 1.969 |
| H37Rv_KO_Rv1272 | 0.225 | 1.306 |
| H37Rv_KO_SugABC | -1.267 | 0.905 |
| H37Rv_KO_MbtN | -0.194 | 0.057 |
| Trans05 | -0.476 | 1.703 |
| macrophage_unactivated | 1.054 | -1.269 |
| IL1 | -0.819 | 0.154 |
| Rapamycin | 0.0 | -0.239 |
| Tcell | -0.658 | -0.782 |
| GMCSF | -0.533 | -0.829 |
| IFNab | -0.193 | 1.007 |
| IFNg | -1.165 | -2.777 |
| IFNg_GMCSF1 | -0.635 | -2.536 |
| Rv1432_day32 | 1.008 | -0.271 |
| Rv1565c_day32 | 1.399 | 0.359 |
| secA2_input | -0.064 | 0.928 |
| delta_Rv3594 | -0.101 | 0.73 |
| delta_Rv3717 | -0.055 | 0.164 |
| delta_Rv3811 | -0.628 | 1.322 |
| delta_Rv0954 | -1.765 | 0.947 |
| PonA1 | 1.348 | 0.066 |
| EccD1_KO | 0.171 | 0.089 |
| EspI_KO | 0.59 | -0.408 |
| PE35_KO | 0.735 | -0.417 |
| PPE68_KO | 0.627 | 0.086 |
| glycerol2 | -0.385 | -0.157 |
| lignocerate | 0.178 | -0.2 |
| oleate | -1.0 | 0.328 |
| phosphatidylcholine | 0.08 | 0.049 |
| acetate | 0.617 | -0.53 |
| glucAc | 0.598 | -0.837 |
| Rv0950ko | 1.034 | -1.113 |
| Rv1096ko | 0.546 | 0.591 |
| Rv3684ko | 0.927 | -0.481 |
| delta_otsA_trehalose | -0.459 | -0.5 |