Top 10 genes with highest correlation to Rv3568c/hsaC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3544c/fadE28 | (cc=0.7318) | info on Rv3544c/fadE28 |
| Rv3551/- | (cc=0.7243) | info on Rv3551/- |
| Rv3502c/- | (cc=0.7069) | info on Rv3502c/- |
| Rv3614c/espD | (cc=0.6944) | info on Rv3614c/espD |
| Rv2604c/snoP | (cc=0.6881) | info on Rv2604c/snoP |
| Rv3883c/mycP1 | (cc=0.6731) | info on Rv3883c/mycP1 |
| Rv3542c/- | (cc=0.6704) | info on Rv3542c/- |
| Rv3615c/espC | (cc=0.6674) | info on Rv3615c/espC |
| Rv3870/eccCa1 | (cc=0.6632) | info on Rv3870/eccCa1 |
| Rv3556c/fadA6 | (cc=0.6572) | info on Rv3556c/fadA6 |
Correlation of Rv3568c/hsaC with Rv3551/-
Normalized LFCs for Rv3568c/hsaC:
(description and provenance of datasets)
| Rv3568c/hsaC | Rv3551/- | |
| Fe_supp_jason_reseq | -0.95 | 0.737 |
| low_pH_jason_reseq | 0.791 | -0.647 |
| NO_jason_reseq | -0.735 | -0.601 |
| B6_jason_reseq | -0.818 | -1.96 |
| MHCII_jason_reseq | -1.422 | -1.726 |
| Isoniazid02 | -1.995 | -0.842 |
| Rifampicin4 | 0.273 | -0.165 |
| Ethambutol3 | -1.789 | -1.515 |
| Meropenem3 | -1.62 | 0.734 |
| Vancomycin16 | -0.785 | -1.008 |
| Rv2680_day32 | -1.381 | -1.788 |
| H37Rv_KO_MarP | 0.313 | 0.246 |
| hypoxia_3wks | 0.0 | 0.08 |
| hypoxia_6wks | -0.177 | -0.693 |
| glycerol | -0.162 | 1.148 |
| cholesterol | -3.167 | -3.657 |
| AJ | -2.575 | -5.857 |
| Bibs02 | -3.354 | -4.616 |
| Bibs02c | -4.365 | -5.282 |
| BL6 | -1.214 | -2.92 |
| BL6a | -2.896 | -5.001 |
| BXD01 | -1.713 | -3.288 |
| BXD010 | -2.171 | -2.306 |
| BXD011 | -1.279 | -2.59 |
| BXD03 | -1.358 | -3.28 |
| BXD04 | -1.874 | -2.999 |
| BXD05 | -1.263 | -3.029 |
| BXD06 | -1.818 | -3.37 |
| BXD07 | -1.822 | -3.496 |
| BXD08 | -1.75 | -3.226 |
| BXD09 | -1.614 | -3.408 |
| CAST | -1.582 | -4.838 |
| CCcont | -1.45 | -0.733 |
| DS01 | -3.853 | -5.963 |
| DS02 | -2.414 | -5.49 |
| DS04 | -2.738 | -4.367 |
| DS0c | -1.776 | -5.476 |
| GP01 | -1.496 | -2.304 |
| GP02 | -1.819 | -1.942 |
| GP0c | -1.97 | -1.016 |
| NOD | -1.715 | -1.847 |
| NZO | -3.135 | -4.838 |
| PWK | -2.106 | -4.757 |
| H37Rv_KO_CtpC | -1.631 | -3.94 |
| H37Rv_KO_CtpD | -2.066 | -2.576 |
| H37Rv_KO_Rv1272 | -1.855 | -3.56 |
| H37Rv_KO_SugABC | 0.39 | -1.783 |
| H37Rv_KO_MbtN | -1.183 | -1.855 |
| Trans05 | -1.551 | -3.299 |
| macrophage_unactivated | -2.326 | 0.66 |
| IL1 | 0.071 | -1.605 |
| Rapamycin | -0.074 | -1.093 |
| Tcell | -2.809 | -2.209 |
| GMCSF | -1.27 | 0.752 |
| IFNab | 0.856 | 2.283 |
| IFNg | -0.406 | -0.249 |
| IFNg_GMCSF1 | -0.154 | -0.606 |
| Rv1432_day32 | -0.884 | -3.863 |
| Rv1565c_day32 | -1.284 | -3.884 |
| secA2_input | -0.266 | -0.54 |
| delta_Rv3594 | 0.647 | -0.26 |
| delta_Rv3717 | 0.076 | 0.191 |
| delta_Rv3811 | 0.217 | 0.556 |
| delta_Rv0954 | -0.775 | 1.149 |
| PonA1 | -0.589 | 0.384 |
| EccD1_KO | 1.181 | 1.246 |
| EspI_KO | 1.358 | 0.539 |
| PE35_KO | 1.324 | 1.105 |
| PPE68_KO | 1.379 | 1.139 |
| glycerol2 | -0.191 | 0.289 |
| lignocerate | -1.263 | 0.785 |
| oleate | 0.269 | -0.537 |
| phosphatidylcholine | -0.706 | -0.106 |
| acetate | -0.474 | 2.234 |
| glucAc | -1.957 | 1.052 |
| Rv0950ko | -0.157 | 1.903 |
| Rv1096ko | 1.016 | 0.329 |
| Rv3684ko | 0.242 | 0.092 |
| delta_otsA_trehalose | 1.813 | 0.325 |